Variovorax sp. PMC12: C4F17_00400
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Entry
C4F17_00400 CDS
T05380
Name
(GenBank) H-NS histone family protein
KO
K03746
DNA-binding protein H-NS
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_00400
03400 DNA repair and recombination proteins [BR:
vam03400
]
C4F17_00400
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
C4F17_00400
DNA repair and recombination proteins [BR:
vam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4F17_00400
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Ortholog
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GFIT
Motif
Pfam:
Histone_HNS
TMF_DNA_bd
Phage_scaffold
AAA_13
Histone_HNS_N
Packaging_FI
HH_AprE
HB_LcnD
V-SNARE
BSH_Fcp1
TENA_THI-4
FlxA
kleA_kleC
SlyX
Motif
Other DBs
NCBI-ProteinID:
AVQ79519
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Position
1:83317..83661
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AA seq
114 aa
AA seq
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MASTLADINSQIKKHDEQIAQLRKQAEDLRNQERAGVIEELRKKIAEYGLTASDLKLTGR
ATAAKRSTGAAPAKAAAKYRGPTGETWSGGRGRKPRWVTEALAAGKSLSDYEIK
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccctcgcagatatcaattcccagatcaagaagcacgacgagcagattgcg
caattgcgcaagcaggctgaagacctgcgcaaccaggagcgcgctggcgtgatcgaagag
ttgcgcaagaagattgccgaatatgggttgacggcttctgatctgaaactgacgggccgc
gccaccgccgccaagcgcagcactggcgccgctccggcaaaggcagccgccaaataccgc
ggcccgacgggcgaaacctggtcgggtggccgaggccgcaagccgcgttgggtgactgaa
gcattggcagccggcaagtcgctctccgattacgagatcaagtaa
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