Variovorax sp. PMC12: C4F17_00420
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Entry
C4F17_00420 CDS
T05380
Name
(GenBank) peptidase
KO
K06194
lipoprotein NlpD
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
C4F17_00420
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AVQ79523
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Position
1:86411..87328
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AA seq
305 aa
AA seq
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MQGIGNRSWFAGITLAFVLVIAGCSTPRGPAPVEDRGTMTRAPAPGTVPGGPPITTDANG
KPLAGIENYGKPGYYAVRPGDTIRRIGIETGQRWQDIVRWNNIDNPDLIEVGQVLRVIPP
TGSGTPVAVAPPSSAASGSEGAVTKPVTPPPVIAPVTPPTGASKPPAPVTASPAGPGSGA
SGDEDLGWIWPASGSLIAGFDEAKNKGYDISGKAGDPVLAAADGRVVYAGAGLRGYGNLI
ILKHNNTYLTAYAHNQALLVKEDQSVQKGQKIAEMGSSDSDRVKLHFEIRRQGKPVDPSR
YLPSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtattggcaatcggagttggttcgctggcatcacgttggcttttgtgctcgtg
atcgcgggctgttccacgccgcgtgggccggcgccggtcgaagaccgcggcaccatgact
cgcgccccggcccccggcacggttcctggcggcccgccgatcaccaccgacgcgaacggc
aagccgcttgccggcattgaaaactacggcaagcccgggtactacgcagtgcgtccgggc
gacacgattcgccgcatcggcatcgagacagggcagcgctggcaagacatcgtgcgctgg
aacaacatcgacaaccccgacctcatcgaagtcggccaggtgctgcgtgtaattcccccg
accggctcgggtactcccgtcgccgtagcgcctccgtcttccgccgccagcgggtccgag
ggcgcggtcaccaagcccgtgacgccgcctcccgtcatcgcgccggtaacgcctcccacc
ggcgcaagcaagccgccggctcccgtcactgcatctccggcaggtccgggcagcggcgcg
tcgggtgacgaagacctcggctggatctggcccgcgagcggttcgctgatcgcaggcttc
gacgaagccaagaacaagggttacgacatcagcggcaaggcgggcgacccggtgctggcc
gccgccgatggccgcgtggtctacgccggcgccggtcttcgcggctacggcaacctgatc
atcctgaagcacaacaacacctacctgaccgcgtatgcgcacaaccaggcgctgctcgtg
aaggaagaccagtcggttcagaagggccagaagatcgccgaaatgggcagcagcgattcc
gatcgcgtcaagctgcacttcgagatccgccgccagggcaagcccgtcgatccctcgcgt
tacctgcccagccggtga
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