Variovorax sp. PMC12: C4F17_00690 Help Entry C4F17_00690       CDS       T05380                                  Name (GenBank) RNA polymerase subunit sigma   KO K23514   RNA polymerase sigma-19 factor, ECF subfamily Organism vam  Variovorax sp. PMC12 Pathway vam02020   Two-component system Brite KEGG Orthology (KO) [BR:vam00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     C4F17_00690  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vam03021]     C4F17_00690 Transcription machinery [BR:vam03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      C4F17_00690 SSDB OrthologParalogGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_24 PhyR_sigma-like GerE HTH_38 HTH_28 Xre-like-HTH HTH_5 HTH_20 HTH_10 HTH_40 HTH_IclR TnsD HTH_7 HTH_11 HTH_29 HTH_36 MarR_2 MarR HVO_A0261_N HTH_AsnC-type Motif Other DBs NCBI-ProteinID:  AVQ79577 LinkDB All DBs Position 1:135759..136382 Genome browser AA seq 207 aa AA seqDB search MRWSALSSSGSLRRRRYNENSSYLYRGPSPLRIRVPPSSAASIAQSASHQQVETLYANHH GWLQGWLRKKLGNAFDAADLAQDTFLRVMRAPGLDRVEEPRAYLTTVARNLLINHVRRRA IEQAYLDALALLPEPMAPAPEVRLMVLETLVEIDRRLLGLPVQAKQAFLLAQLEGLGQAE IAAELGISVSTVKRHLAKAAMRCFFSE NT seq 624 nt NT seq  +upstreamnt  +downstreamnt atgcgctggtcggcgctttcgtcgagtggctccttgcggcggcgtcgatacaatgagaac agttcttatttgtatagagggccttcgccccttcgaatccgcgtgccgccttcctccgca gcgtccattgcccagtccgcctcgcaccagcaggtcgagacgctgtacgccaaccaccac ggctggctgcagggctggctgcgcaagaaactgggcaacgccttcgacgcggcggacctg gcgcaggacaccttcctgcgcgtgatgcgcgcgccggggctggaccgcgtcgaagagccg cgcgcctacctcaccaccgtcgcgcgcaacctgctcatcaaccatgtgcgccgccgcgcc atcgagcaggcttatctcgatgcgctggcgctcctgcccgagcccatggcgcccgcgccc gaagtgcggctcatggtgctggagacgctggtcgagatcgaccggcgcctgcttggcctg cccgtgcaggccaagcaggccttcctgctggcgcagctcgagggcctgggccaggcggag atcgccgcggaacttggcatttcggtgtcgaccgtgaagcggcacctggcgaaggcggcg atgcgttgctttttctcggagtag

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