KEGG   Variovorax sp. PMC12: C4F17_00915
Entry
C4F17_00915       CDS       T05380                                 
Symbol
parC
Name
(GenBank) DNA topoisomerase IV subunit A
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vam03032]
    C4F17_00915 (parC)
   03036 Chromosome and associated proteins [BR:vam03036]
    C4F17_00915 (parC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vam02048]
    C4F17_00915 (parC)
Enzymes [BR:vam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     C4F17_00915 (parC)
DNA replication proteins [BR:vam03032]
 Prokaryotic type
  DNA Topoisomerases
   C4F17_00915 (parC)
Chromosome and associated proteins [BR:vam03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    C4F17_00915 (parC)
Prokaryotic defense system [BR:vam02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    C4F17_00915 (parC)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C CENPH
Other DBs
NCBI-ProteinID: AVQ79619
LinkDB
Position
1:176899..179304
AA seq 801 aa
MDSQPPLDLQGPTDGDTTLTLADYAQTAYLEYALSVVKGRALPDVSDGQKPVQRRILYSM
SRMGLGFGGTNGTVGAKPVKSARVVGDVLGRFHPHSDQAAYDALVRMAQDFSQRYPLVDG
QGNFGSRDGDGAAAMRYTEARLARITSLLLDEIDEGTVDFIPNYDGSTEEPRLLPARLPF
TLLNGASGIAVGLATEIPSHNLREIADACVALIKSNGKLSEEELFAIVPGPDYPGGAQII
SNASDIADAYRTGRGSLKVRARWKIEELARGQWQLVVNELPPGVSTQKVLEEIEEITNPK
VKAGKKALSADQTQLKAAMLSVLDVVRDESSKDAAVRLVFEPKTSRISQDEFITTLLAQT
SLETSSPINLTMVGIDGKPTQKSLRQMLNEWIAFREVTVEKRSRHRLNKVMDRIHILEGR
QLVLLNIDEVIAIIRAAEDPKAALIARFNLSDRQAEDILEIRLRQLARLEAIKIEQELSG
LRDEQKKLEDILGSPAALRRLLVKEIEADAKTFEDPRRTLIQAEKRAVAEVKVVDEPVTV
IVSQKGWVRAQKGWASEKAAAANGGNGASAPEYSFKSGDSLYGAFECRSVDTLLVFGSAK
DKSVRVYTVPVASLPGARGDGQPVTTLIELDAGTHVTHFFAGPVGASVLLANTGGYGFIA
TVENMMSRQRGGKAFIDVGEGEQLCRPSLVGGASGAEPMPAATHVACASTGGRILTFDIT
ELKSLPKGGRGLTLIDLEPKDTLAGAAAYTRSVKIEGIGRGGKEREETLEIRTLNNARGS
RARKGKAADLGFKPSSIVRVQ
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggactcccaaccaccgctcgatctccagggtcccaccgacggcgacaccaccctcacc
cttgccgactacgcgcagaccgcctacctcgaatacgccctcagcgtggtcaagggccgc
gcgctgcccgatgtgtccgacggccagaagccggtgcagcggcgcatcctgtattcgatg
tcgcgcatggggctgggcttcgggggcaccaacggcaccgtgggcgccaagccggtcaaa
agcgcgcgcgtggtcggcgacgtgctcggccgcttccacccgcacagcgaccaggcggcc
tacgacgcgctggtgcgcatggcgcaagacttctcgcagcgctatccgctggtcgacggc
cagggcaacttcggcagccgcgacggcgacggtgccgccgccatgcgctacaccgaagca
cgcctggcgcgcatcaccagcctgctgctcgacgagatcgacgagggcacggtcgacttc
attcccaactacgacggcagcaccgaagaaccgcgcctgctgcccgcgcggctgccgttc
acgctgctcaatggcgcgagcggcatcgcggtgggcctggccaccgaaatcccgagccac
aacctgcgcgagattgccgacgcctgcgtggcgctgatcaagtcgaacggcaagctcagc
gaggaagaactcttcgccatcgtgcccggccccgactaccccggtggcgcgcagatcatc
agcaacgcgagcgacatcgccgatgcctaccgcaccggccgcggttcgctgaaggtgcgc
gcgcgctggaagatcgaggaactcgcgcgcggccagtggcagctggtggtcaacgagctg
ccgccgggcgtcagcacgcagaaggtgctcgaggaaatcgaggaaatcaccaaccccaag
gtcaaagccggcaagaaggccctgagcgccgaccagacccagttgaaggccgcgatgctg
tcggtgctggacgtggtgcgcgacgagtccagcaaggacgccgccgtgcgcctggtgttc
gagcccaagacctcgcgcatcagccaggacgagttcatcaccacgctgctcgcgcagacc
tcgctggagacttcgtcgccgatcaacctcacgatggtcggcatcgacggcaagcccacg
cagaagtcgctgcgccagatgctcaacgagtggatcgcgttccgcgaagtcaccgtcgag
aagcgctcgcggcatcggctcaacaaggtgatggaccgcatccacatcctcgaaggccgg
cagctggtgctgctgaacatcgacgaggtgatcgccatcatccgcgcggcggaagacccg
aaggcggcgctcatcgcgcgcttcaacctcagtgatcgccaggccgaggacatcctcgaa
atccggctgcgccagctcgcgcggctcgaagccatcaagatcgaacaggagctgtcgggc
ctgcgcgacgagcagaagaagctcgaagacatcctcggcagccccgccgcgctgcgccgc
ctgctggtgaaggagatcgaggccgacgccaagaccttcgaggacccgcgccgcacgctc
atccaggccgagaagcgtgccgtggccgaggtgaaggtggtcgacgagcccgtcaccgtc
atcgtgtcgcagaagggctgggtccgtgcgcagaagggctgggccagcgagaaggcggcc
gccgcgaacggcggcaacggcgcttcggcccccgaatacagcttcaagtcgggcgactcg
ctgtacggcgccttcgaatgccgcagcgtcgacacgctgctcgtgttcggcagcgccaag
gacaagagcgttcgcgtctacaccgtgcccgtggcgtcgctgcccggcgcgcgcggcgac
ggccagcccgttaccacgctcatcgagctggatgccggcacgcacgtcacgcacttcttc
gccggcccggtgggcgccagcgtgctgctggccaacaccggcggctacggcttcatcgcc
accgtcgagaacatgatgtcgcgccagcgcggcggcaaggccttcatcgacgtgggcgag
ggcgagcagctctgccgtccgtcgctggtcggcggcgcgagcggcgccgagccgatgccg
gccgccacgcacgtggcctgcgcctcgaccggcggccgcatcctgaccttcgacatcacc
gagctcaagagcctgcccaagggcggccgcggcctgacgctgatcgacctcgagcccaag
gacaccctcgccggagccgccgcctacacgcgcagcgtgaagatcgaaggcatcggccgc
ggcggcaaggagcgcgaagagaccctggagatccgcaccctcaacaacgcccgcggcagc
cgcgcgcgcaagggcaaggcggccgacctcggcttcaagccgtcgagcatcgtgcgggtg
cagtga

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