Variovorax sp. PMC12: C4F17_01155
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Entry
C4F17_01155 CDS
T05380
Name
(GenBank) sulfatase
KO
K19353
heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C4F17_01155
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_01155
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Core region
C4F17_01155
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sulfatase
EptA_B_N
Motif
Other DBs
NCBI-ProteinID:
AVQ79664
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Position
1:complement(243844..245691)
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AA seq
615 aa
AA seq
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MSGGAGRARLGALGSISSAGISPTASLPHLSPREPRCLIAPCAAGETAVPCASAGAESAP
PIPVRAAGAARLTSLPAAPPQPRHGAWLACGVVGATLLALIALGHDGRRIAQLAVLALPM
VLWLAWPLRSARMRRLRTVLVWLWAMGFALDATVRAYLLDTYQAAPDGAMVLGAAANTNA
RESTEYLWMHWRSAAVWGALLIASGLLVGMFARRGAVAPTAARPARWITALLALALLVSC
VAYASKPWRRLHPAFFWTQWAQSLRTLQAAWADQQQQRDRLTAQAKAIAPVITRAGPSTV
VLVITDSINRDNMGLYGYGRPTTPRLQAHKAQTGEQMAVLKNAWSVDASTLPALRNMFRF
GLPDSENPPHVLALARAAGYKVWWISNHDDLAIEQQHARFADVVDMVNRTPGRASASLDG
EVLDCVQEALADTSTERKLIVVHLMGAHPHYSLRFPANANPFDDDIDAVENGLVKNGRSS
WVRRFRQEYDAALLYHDFVVSELLQQTRSAGKPQDYRAWMYLSDHGQEVGHVSDRAGHSP
STASGYRIPAVVWRNQQPLPASEMQQPFRADWTGWTLMDLLHIQWNGQKPERDVLGGAYR
WQAPEIPVAVESFSR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggagccgggcgagcccgtctgggcgccctcggctcaataagttccgcgggg
atttccccgacagcctccctcccccacctctccccccgcgagccccgctgcctcatagcc
ccctgcgcagccggggagactgcggtgccctgcgcttcggccggggcagaatccgccccg
cccatccctgttcgcgctgccggcgctgcccgcttgacctccctccccgctgccccaccc
cagccccgccacggcgcatggcttgcctgcggcgtggtcggcgccaccctgctggcgctg
atcgcgctgggccacgacggccggcgcatcgcgcagctcgcggtgctggcattgccgatg
gtgctgtggctcgcatggccgctgcgcagcgcgcgcatgcgtcggctgcgcacggtgctg
gtctggctctgggccatgggctttgcgctggacgccacggtgcgggcctacctgctcgac
acctatcaagccgcgcccgacggcgcgatggtgcttggcgcggcagccaacaccaacgcg
cgcgagagcacggagtacctgtggatgcactggcgctcggcggccgtgtggggcgccttg
ctgatcgcctcgggcctgctggtgggcatgttcgcgcggcgcggcgcggtggccccgaca
gcagcgcgccccgcccgctggatcaccgcgctgctggcgctggcgctgctggtgtcctgc
gtggcctatgcgagcaagccgtggaggcggctgcatcccgcgttcttctggacacagtgg
gcccagtcgctgcgcacgctgcaggccgcctgggccgaccagcagcagcaacgcgaccgc
ctgacggcgcaggccaaggccattgcgcccgtcatcacgcgggccgggccttccaccgtg
gtgctggtcatcaccgacagcatcaaccgcgacaacatgggcctgtacggctacggccgc
ccgaccacgccgcgcctgcaggcgcacaaggcgcagaccggcgagcagatggcggtgctg
aagaacgcatggtcggtggacgcgagcaccctgcccgccttgcgcaacatgttccgcttc
ggcctgcccgacagcgagaacccgccgcacgtgctggcactggcgcgcgccgcgggctac
aaggtctggtggatcagcaaccacgacgacctggccatcgagcagcagcatgcgcgcttc
gccgacgtggtcgacatggtcaaccgcacgccgggccgcgccagcgcctcgctggacggc
gaggtgctcgactgcgtgcaggaagcgctggccgacaccagcaccgagcgcaagctgatc
gtggtccacctgatgggcgcgcatccgcactacagcctgcgctttccggcaaacgccaac
cccttcgacgacgacatcgacgcggtggaaaacggcctggtgaagaacggccgctcctca
tgggtgcggcgcttccgccaggagtacgacgcggcgctgctttatcacgacttcgtggtg
tccgagctgctgcagcagacgcgcagcgcgggcaagccgcaggactaccgcgcatggatg
tacctgtcggaccacgggcaggaagtgggccatgtgagcgaccgggcgggccacagcccc
tcgaccgcgtcgggctaccgcattccggccgtggtgtggcgcaaccagcagccgctgccg
gccagcgagatgcagcagccgtttcgcgcggactggaccggctggaccctgatggacctg
ctccacatccagtggaacgggcagaagcccgagcgcgacgtgctgggcggcgcctaccgc
tggcaggcgccggagattccggtggcggtggagtcgttctcgcgttag
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