Variovorax sp. PMC12: C4F17_01355
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Entry
C4F17_01355 CDS
T05380
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_01355 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_01355 (cydD)
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C4F17_01355 (cydD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
nSTAND1
AAA_16
Mg_chelatase
AAA_29
AAA_22
AAA_19
bpMoxR
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AVQ79703
LinkDB
All DBs
Position
1:287573..289261
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AA seq
562 aa
AA seq
DB search
MAQHSHPRSPLKAFASPDVGGVVQGAAALLWLPQAALLAMAVQGLASGQGLRAVWLPAGA
ILLLGLLRAACEAWGARRTFGRARARLSALRAQTAEALADGSPLDRGRAPSGKAASVLAE
QAEALVPYLVRYQPARWRATVVPVFILGAVACFSWVAALVLLVAAPLIPIFMAIVGWRAK
AASEAQMVEMGSMNAFLLDRLRGLATLRALDAVDATAHRLGDAAQSLRVRTMSVLRIAFL
SSAVMELFSALGVAMVAAYVGFHLLGSLGFGTWGRTLSLGEGLFVLLLAPAFFEPLRELS
AVWHDRAAGEAALQALDGLQQNTLPLPGASASLKRAATGAAGAAPAVAVHGLHFSWPGET
NPVFDGLELRVAAGEHIALAGPSGSGKTALLSLLAGLVPAARGEISIGGVPLTDHTVAAL
RQRMAWMGQAPHVFAGSVEANVALGREDVGTPRVAEAMRFASLDAVAQAHPGTALGEGGR
GLSGGEAVRLALARIAVHPHADLLLVDEPTAHLDSETAARVADALVELARGKTLIVATHD
PALAARMDRVVSLGAQAMEKAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcactcgcacccccgatcgccgttgaaggctttcgcgtcgcccgacgtcggc
ggggtggtgcaaggcgctgccgcgctgctttggctgccgcaggcggccctgctggcgatg
gcggtgcaggggctggcgtcggggcagggccttcgcgcggtgtggctgccggccggcgcg
atcctgctgctgggcttgttgcgcgccgcctgcgaggcctggggcgcacgccggaccttc
ggccgcgcacgggcccggctcagcgcactgcgcgcgcagacggccgaggcattggccgac
ggatctccgctggaccggggccgcgcgccttcgggcaaggccgccagcgtgcttgcggaa
caggcggaggcgctggtgccttacctcgtgcgctaccagccggcgcgttggcgcgcgacg
gtcgtgccggtcttcattcttggcgcggtggcctgcttctcgtgggtggctgcgctggtg
ctgctggtcgcggcgccgctgatcccgatcttcatggccatcgtcggctggcgcgccaag
gccgcgagcgaggcgcagatggtcgagatgggcagcatgaacgccttcctgctcgaccgc
ctgcgcggcctggcgaccctgcgcgcgctcgatgccgtcgacgccacggcgcaccggctc
ggcgatgccgcgcagtcgctgcgcgtgcggacgatgtcggtgctgcgcatcgcatttctc
tcgtcggccgtgatggagcttttctcggccctgggcgtggcgatggtggcggcatatgtc
ggcttccacctgctgggctcgctcggcttcgggacctgggggcgaacgctgagcctgggc
gaggggctgttcgtcctgctgctggcgccggctttcttcgagccgctgcgcgagctgtcg
gcggtgtggcacgaccgggcggcgggcgaggcggcactccaggcgctcgatgggctgcag
cagaacacgctgccattgcccggcgcgagcgcgtcgctcaagcgtgcggccacgggcgcc
gccggcgccgcgcccgccgtcgccgtccacggcctgcatttctcctggccgggagaaacg
aatccggtcttcgacggcctggagcttcgcgttgcggccggtgaacacatcgcgctggcc
gggcccagcggctcgggcaagacggctttgctgtcgctgctcgcgggcctcgtgccggcg
gcgcgcggcgagatctcgatcggcggcgtgccgctcaccgatcacacggttgccgcgctg
cgccagcgcatggcgtggatgggtcaggcgccgcacgtcttcgccggatcggtagaggcc
aatgtggccttgggccgcgaggacgtcggcacgccccgcgtggccgaggccatgcgcttc
gcctcgctcgacgccgtggcgcaggcgcatcccggcacggcgctgggcgagggcgggcgc
ggcctttcagggggcgaggccgtgcggcttgcgctggcccgcatcgcggtgcatccgcac
gccgacctgctgctggtcgacgagccgaccgcgcacctcgattccgagaccgccgcccgc
gtggccgacgccttggtcgaactggcacgcggcaagacgctgatcgtcgccacgcacgac
cccgcgctcgcggcgcgcatggaccgcgtggtgagcctcggcgcccaagccatggagaag
gccgcatga
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