Variovorax sp. PMC12: C4F17_01430
Help
Entry
C4F17_01430 CDS
T05380
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_01430
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AVQ79716
LinkDB
All DBs
Position
1:complement(309071..311365)
Genome browser
AA seq
764 aa
AA seq
DB search
MNRLSSSTRRRTPVALALVGLVSSLPAAFAQQAPQPAAPSSTASSPAPGTSVPTTLREVQ
VQGAQDRTGFGANPATISRLPADLRDAPQSVTVINQAVMQSQAATSLASALRNVPGLTIG
GAEGGQIGTNINLNGFSARTDLYLDGARDRAQYYRDTFALESVEVLMGPSSMLFGRGSTG
GIINQVTKKPSLTPAGEVSVSASTTGLVRSTVDVNRPLSDTSAFRIAAMGQQGDASTREQ
TKLKDFGLDASLKFGINTPTQVTLSALVQHNRDQPDYGVPPLNGHPAKVDRDQAYGFSDD
RTISDIQAFGALVQHKITADTSIRNQTQYNDVTTDARETAPQSIGTLSSKNVFTPFSTGT
TAVPAAAFSSLPLSTLWVRQQSHDRTIHDKSLFNLTELSTRFNTGSVKHSLLVGLELGHD
TYENQAYYRNGTCNGVALNPAGGTSGYAACSPLLAPYQGNTPSTAPSLRGNLADASATTV
AGYVNDTIELSPQWKLVAGVRQDHYRASISNSIPTATTLASESQTVDFTSVRAGAIWQPT
PEQSYYVSYSTSFNPSLEQLVATTGATQPLPPEKNKAYELGGKWDLNDGNLSLTAAAFQI
TQTNARAQNNDGTYSATGTIRVNGARAGVAGRVTDKLQLFGAYTHLDATIVDGIAPGTLG
KVPANTPKDAASLWATYAITPEWEVGGGTTYSAKRYANNTDLVEVGGYVRLDAMLAYHQP
KYDIRLNLFNLANRHYYDALIPSDGGRAVPGSGRAATLTFTYRL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctctcgtcttcgacacgccgccgcacgcctgttgcgctcgcacttgtcggc
cttgtttcctcgctgcccgccgcgttcgcgcaacaggccccgcaaccggcggcgccgagc
agcaccgcgagttcgcctgctccgggcacatcggtgccgaccacgctgcgcgaagtccag
gtgcagggcgcgcaggacaggaccggcttcggcgccaaccccgcgaccatcagccgcctg
ccggccgacctgcgcgatgcgccgcaatccgtcaccgtgatcaaccaggccgtgatgcag
tcgcaggccgcgacttcgctggccagcgcgctgcgcaacgtgccgggcctgaccatcggc
ggtgcggagggcgggcagatcggcaccaacatcaacctcaacggcttctcggcccgcacc
gacctgtacctggacggcgcgcgcgaccgcgcccagtactaccgcgacaccttcgcgctc
gaatcggtcgaggtgctcatgggcccctcgtcgatgctgttcggccgcggttccacgggc
ggcatcatcaaccaggtgaccaagaagccgtcgctcacgccggcgggcgaagtgtcggtg
tctgccagcaccacgggcttggtgcgctcgaccgtcgacgtcaaccgcccgctgtccgac
acctccgccttccgcatcgcggccatgggccagcagggtgacgccagcacgcgcgagcag
acgaagctgaaggacttcggcctggacgcgtcgctcaagttcggcatcaacacgccgacg
caggtcacgctgtcggcgctggtgcagcacaaccgcgaccagcccgactacggcgtgccg
ccgctcaacggccatccggccaaggtcgaccgcgaccaggcctacggcttcagcgacgac
cgcacgatctccgacatccaggccttcggtgccctggtgcagcacaagatcacggccgac
acctcgatccgcaaccagacgcagtacaacgacgtgaccaccgacgcacgcgagaccgcg
ccgcagtccatcggcacgctgtcgtcgaagaacgtgttcacgcccttctccaccggcacc
acggccgtgccggcggccgccttctcgtcgctgccgctgagcacgctgtgggtgcgccag
cagagccatgaccgcacgatccacgacaagtcgctgttcaacctgaccgagctcagtacc
aggttcaataccggctccgtcaagcattcgctgctcgttggcctcgagctgggccacgac
acctacgagaaccaggcctactaccgcaacggcacgtgcaacggcgtggcattgaacccg
gcgggcggcaccagcggctatgccgcctgctcgccgcttctggcgccctaccagggcaac
acgccgagcaccgcgcccagcctgcgcggcaacctcgccgacgccagcgccaccacggtg
gccggctatgtgaacgacacgatcgagctcagcccgcagtggaagctggtggccggcgtg
cgccaggaccactaccgcgccagcatctccaacagcattcccaccgcgaccacgctggcc
tccgagagccagacggtcgacttcaccagtgtgcgtgcgggcgccatctggcagcccacg
cccgagcagtcgtactacgtgtcttacagcacttcgttcaacccctcgctcgagcagctc
gtggccaccacgggcgccacgcagccgctgccgcccgagaagaacaaggcctacgaactc
ggcggcaagtgggacctgaacgacggcaacctctcgctcacggccgccgcgttccagatc
acgcagaccaacgcccgcgcgcagaacaacgacggcacctacagcgcgaccggcacgatc
cgcgtgaacggcgcgcgcgccggcgtggccggccgcgtgaccgacaagctgcagctgttc
ggcgcctacacgcacctggacgcgaccatcgtcgacggcatcgcccccggcacgctcggc
aaggtgcccgccaacacgccgaaagacgcggccagcctgtgggccacctacgccatcacg
cccgaatgggaagtcggcggcggcaccacctacagcgcgaagcgctacgccaacaacacc
gacctggtggaggtcggcggctacgtccggctcgatgcgatgctggcttaccatcagccc
aagtacgacatccggctgaacctgttcaacctggccaaccgccactactacgacgcgctg
atcccctcggacggcggacgcgcggtgccgggctcgggccgggccgccacgctgaccttc
acctaccgcctctga
DBGET
integrated database retrieval system
