Variovorax sp. PMC12: C4F17_01540
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Entry
C4F17_01540 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K07126
uncharacterized protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
C4F17_01540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_27
Motif
Other DBs
NCBI-ProteinID:
AVQ79736
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Position
1:343201..345675
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AA seq
824 aa
AA seq
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MSNAARVFLDCYAQGKEPEGGWTFGKALSQARLDYSHASLERVNTLLDQIRAKVKPEREA
FLSTPGGRNFCDLLAYYLVSFVVKKSGARIGWHDFASAQQVLGSAARLAEGTQSRIVAIA
RDVGVALLPLVWIEDKLFGAGLAPTCANYVAGCGARLDHAGPVAWAAAVHSLGFLASYSM
FMVSGGTVLAPTLLRPDADGERFSLVAMFDDTADGALQRGRAALAQEEGGPRHAAFACEA
SVGLPKGRTAIVVELRCHGDNPLAVTVVFPYRAATDPHGFAIFKPQLIEGSVPAEAEGLF
NRSLEAGIQHFNWPSGSWARFRDAAQAVETQARQQDRDVVAYADGRHAMTGDAVLSGRGL
FPSCVIEVGQAAGEAAGLRIQLCNGTRQTLSPDEARDTLVFVARQSPDFVTACVRFLQQQ
AVNGSLDQTLRGAPHAQFALGNLQFHGLALERDQRQGLCLWQSAADSGYAPAEREMGIIY
LEGGVLAPDPSKGLGLLRRAVDKGDPVALTRLAMMYQEGLGVARDEAKAVTLLRHAAAAG
FADAQYHLAMCLQDGRGVVQDYELCVQLYAQAAAQGHAASINNLADKYEHGLGVAQDFDM
ALSLYRNAAEKNVIAAWYSLAGMYADGRGVARDVEQAVRWMKLAAEHDFLDAKARLRAMV
LDSNAALRSQGAAALLDASRLDAGTLHELAGRIYTPEIAESLPVAFLLYLQAANKGHADA
QLQVAFRYRRGFGVEMDVPQAIRWYQRAMASGSPYAGEDMGEIFEYGELVPKDLRRAAEL
YAKAIEAGSLTARDRLEALQRSGVATPDPGKVGGTGKPGWKFWY
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcggcgcgagtttttctggattgctatgcgcaaggcaaggagccggagggc
gggtggacattcggcaaggccttgagccaggctcggctcgactattcgcatgccagcctc
gagcgggtgaacacgttgctcgatcagatcagggccaaggtgaagcccgagcgcgaggca
tttctctcaacgccgggcgggcgcaacttctgtgacttgctggcctactacctcgtgagc
ttcgtcgtgaagaagtctggcgcgcgcatcggctggcacgacttcgcatcggcgcaacag
gtgctgggctcggccgcacgcttggcggaaggcacgcagtcgcgcatcgtggcaattgcc
agggatgtcggcgtggcgttgctgccactcgtatggatcgaagacaagctgttcggcgcc
ggcctcgcgcccacctgcgcgaactacgtggcgggctgcggcgcgcggctcgaccacgcg
gggccagtggcctgggcagcggccgtgcactcgctcggcttcctcgcctcctattcgatg
ttcatggtgtcggggggcacggtcctggcgccgacattgctgcggcccgatgcggatggc
gagcgcttctctctggtggccatgttcgacgacacggctgacggggcgctgcagcgcggc
cgtgccgccttggcgcaggaagagggcggtccccgccatgccgcgttcgcctgcgaggcc
agtgtggggctgcccaaggggcgcacggccatcgtggtggaactgcgttgccacggcgac
aacccgttggcagtcaccgtcgtgttcccgtaccgtgccgcgaccgacccgcacggtttt
gcgatcttcaagccccagttgatcgaaggcagcgtgccggccgaggccgaggggctgttc
aatcgctccctggaggccggtatccagcacttcaactggccgtcgggctcatgggcgcgc
ttccgcgacgcagcgcaggccgtcgagacgcaagcccggcagcaagatcgggacgtggtt
gcctacgccgacggacggcacgcgatgacaggcgacgcggtgttgtccggccgaggcctt
ttcccctcgtgcgtgatcgaggttgggcaggcggcgggggaggccgccgggctgcggatc
caactctgcaatggcacgaggcagacgctgtcgccggacgaggcgagggacacgctggta
ttcgttgcgcggcagtcgcctgatttcgtcacggcttgcgtgcgttttctccagcagcag
gcagtcaacggctcgctcgaccaaacgctgcggggagcgccgcatgcgcagttcgcgctt
ggcaaccttcagttccacggccttgcgctcgagcgcgaccagaggcaagggctgtgcctc
tggcagagcgcagccgactcgggctacgcgccggccgagcgcgagatgggcatcatctac
ctggaaggtggcgtgctcgcgccagacccctccaaagggctgggcctgctgcgccgcgcg
gtggacaagggcgatccggtcgcgctgacgcgcttggcgatgatgtatcaggagggcttg
ggtgtggccagggacgaagccaaagccgtgacattgctgaggcatgcggccgctgccgga
ttcgcggacgcccagtaccacttggccatgtgtcttcaggacggccggggcgtcgttcag
gattacgagctctgcgtgcaactctacgcccaggccgctgcccaggggcatgccgcgtca
atcaacaacctggccgacaagtacgagcatgggcttggcgtggcgcaggatttcgacatg
gcgttgtcgctctaccggaatgcggctgaaaagaacgtcatcgccgcgtggtacagcctt
gccggcatgtatgccgacggtcgaggcgtggcacgcgatgtcgagcaggcagtgcgctgg
atgaagctggcggccgagcacgacttcctcgacgcgaaggcccgcctgcgagcgatggtg
ttggactcgaatgccgcccttcgttcgcaaggcgccgcggcgctgctcgatgcttcacgg
ctcgatgcaggcaccctccatgaactggccgggcgcatctacacccccgagatcgcggag
tccttgccggtcgcgttcctgctttatctgcaggcagcgaacaaagggcatgccgatgcg
caactgcaggttgcctttcgctatcggcgcggctttggcgtggagatggatgtgccgcag
gccatccgttggtaccagcgagccatggcttccggcagcccgtatgcgggcgaggatatg
ggcgaaatcttcgaatacggcgaattggtgccgaaggacctgcgtcgcgcggccgagctg
tatgcgaaggcgatcgaggccggcagcctcacggcccgcgaccggctggaggcgctgcag
cggtcgggtgtggcaacgcccgaccccggcaaggtgggcggtaccggcaagcccggatgg
aagttctggtactag
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