Variovorax sp. PMC12: C4F17_01985
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Entry
C4F17_01985 CDS
T05380
Name
(GenBank) aspartate aminotransferase
KO
K14267
N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.17
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00300
Lysine biosynthesis
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01230
Biosynthesis of amino acids
Module
vam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4F17_01985
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_01985
Enzymes [BR:
vam01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.17 succinyldiaminopimelate transaminase
C4F17_01985
Amino acid related enzymes [BR:
vam01007
]
Aminotransferase (transaminase)
Class I
C4F17_01985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AVQ84430
LinkDB
All DBs
Position
1:complement(434724..435893)
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AA seq
389 aa
AA seq
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MPRNRPARLTHIAGIGVDRMGAIADDADGPPFLRLENLDVDIPPDPEAVARTMRAASEDS
DNSYLPFVGQSRLRDVAARHVSALSGVAYSGARNCVISAGGLSGILNALLATVEVGDEVL
VTDPTYAGLLNRIRLAGGTPKYAPFRFTPGGEWKLDRDALQAAVGPRVRVMLLMSPSMPT
GGCFDEEDWRAIADLCVRHDLTLILDTAMERLLYDGRQVIHPAGLPGMAGRTITVGSSAK
ELRMIGWRVGWTVAPESYMPDLVAVSLANVVVPVGIAQDAVATALEQSPRTLAPYVSELE
RRRDTVLDELKGLPVGVPAGGWSLLLRASDFGIDGQTLSERLLKSRVCATAMQGWGETHG
AQYLRFVFSNEPVERLRGLGDKVRAALGA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaccgccccgcccgcctgacccacatcgccggcatcggcgtcgaccgcatg
ggcgccattgccgatgacgccgacggcccgccgttccttcgactggagaacctcgacgtc
gacatcccgcccgacccggaggccgtcgcgcgcacgatgcgcgccgcctccgaagactcg
gacaacagctacctgcccttcgtcggccagtcgcggctgcgcgacgtggcggcgcggcac
gtgtcggcgctgtcgggcgtggcgtacagcggcgcgcgcaactgcgtgatctcggccggc
gggctgtcgggcatcctcaatgcgctgctcgccaccgtcgaggtcggcgacgaagtgctg
gtgaccgatccgacctacgccgggctgctcaaccgcatccgccttgccggcggcaccccg
aagtacgcgccctttcgcttcacgcccggcggcgaatggaagctggaccgcgacgcgctt
caggccgccgtcggcccgcgcgtgcgggtgatgctgctgatgtctccgtcgatgcccacc
ggcggctgcttcgacgaggaagactggcgcgccatcgccgacctgtgcgtgcggcacgac
ctgacgctgatcctcgacacggccatggaacggctgctgtacgacggccgccaggtgatc
caccccgcgggcctgccgggcatggccgggcgcaccatcaccgtcggctcgtcggccaag
gaactgcgcatgatcggctggcgcgtgggctggaccgtggcacccgagagctacatgccc
gacctcgtggccgtgtcgctcgcgaacgtggtggtgccggtgggcatcgcgcaggacgcg
gtggcgacggcgctggagcaatcgcctcgcacgctcgcgccgtatgtaagcgaactggaa
cgccggcgagacacggtgctcgacgaactcaaggggctgccggtcggcgtgccggccggc
ggctggtcgctgctgctgcgtgcgagcgacttcggcatcgacgggcagacgctgtccgag
cggctgttgaagtcgcgcgtctgcgccaccgcgatgcagggctggggcgagacgcatggc
gcgcagtacctgcgcttcgttttctccaacgaacccgtggagcggttgcgcggactgggc
gacaaggtccgcgccgcgctgggcgcctga
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