Variovorax sp. PMC12: C4F17_02140
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Entry
C4F17_02140 CDS
T05380
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00500
Starch and sucrose metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
Module
vam_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vam_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C4F17_02140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_02140
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
C4F17_02140
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4F17_02140
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
AVQ79840
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Position
1:471219..473129
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AA seq
636 aa
AA seq
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MPVPLNHSLPGERDAYLFHEGTHARLYDLLGCHVQPEGGARFAVWAPNAESVSVVGDWNY
WSGDADPLAPSPDQTGIWIGHVPNAVPGQAYKYRIRSRQGGYTVDKADPVAFSAEHPPAT
GSRICELAYEWGDDEWMATRGMHNSLEAPMSVYEVHLGSWRRHDGQFLGYREIARELAAY
VRKMGFTHVELMPVTEHPFYGSWGYQTTGYFAPTARYGSPQDFMYLVDHLHQQGIGVLLD
WVPSHFPTDEHGLSFFDGTHLFEHADPRQGFHPEWNSSIFNYGRPEVRSFLVSSGLFWLD
LYHLDGLRVDAVASMLYLDYARKHGEWIPNRHGGRENLEAIDFLQTLNRAVYREFPDTLT
VAEESTAWPRVSRPTDMDGLGFGEKWNMGWMHDTLAYMKEDPVNRKYHHHKLTFSLVYAF
NENFVLPYSHDEVVHGKGSLINKMPGDSWQQFANLRALFGFMWAHPGKKLLFMGDEFGQR
REWTHDGELEWWVTQQQGHGGLQRLVAQLNRVYRESPALHQLDFSAAGFEWIAADDAERS
VFAFLRKARDGSPPLLVVSNMTPVPRTNYLLGVPGGVGSGFWRELINTDATEFGGAGWGN
FGGVEAAPVRSHGRMQSVSLTLPPLSTLILEQRPSP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcctttgaaccattcactcccaggcgagcgagacgcctatcttttccacgaa
ggaacgcacgcgcggctctacgacttgctgggatgccacgtgcagccggaaggcggcgcg
cgcttcgccgtgtgggcgcccaatgccgagtcggtctcggtggtgggcgactggaactac
tggtcgggcgatgccgacccgctggcgcccagccccgaccagaccggcatctggatcggc
cacgtgcccaacgcggtgcccgggcaggcctacaagtaccgcatccgttcgcgccagggc
ggctacaccgtcgacaaggccgaccccgtggccttcagcgcggagcatccgccggccacc
ggctcgcgcatctgcgaactcgcctacgaatggggcgatgacgaatggatggccacgcgc
ggcatgcacaactcgctcgaggcgccgatgtcggtgtacgaggtgcacctgggctcctgg
cgccggcatgacggacagttcctcggctaccgcgagatcgcgcgcgaactggccgcatac
gtcaggaagatgggtttcacgcacgtcgagctgatgcccgtgaccgagcatccgttctac
ggctcctggggctaccagaccaccggctacttcgcgcccaccgcgcgctacggttcgccg
caggacttcatgtacctcgtcgaccacctgcaccagcagggcatcggcgtgctgctggac
tgggtgccttcgcacttcccgaccgacgagcacggcctctctttcttcgacggcacgcac
ctcttcgaacatgccgacccgcgccagggcttccacccggagtggaactccagcatcttc
aactacggccgtcccgaggtgcgcagcttcctggtgtcgtcgggcctgttctggctcgac
ctgtaccacctggacggactgcgcgtggacgccgtggcatccatgctgtacctcgactac
gcccgcaagcacggcgagtggatccccaaccgccacggcggccgcgagaacctggaggcc
atcgatttcctgcagacgctgaaccgcgccgtctaccgcgagtttccggacacgctcacc
gtggcggaggagtccaccgcctggccgcgcgtttcgcgccccaccgacatggacggcctg
ggcttcggcgagaaatggaacatgggctggatgcacgacacgctggcctacatgaaggaa
gacccggtcaatcgcaagtaccaccaccacaagctgaccttctcgctggtgtatgccttc
aacgagaacttcgtgctgccttactcgcatgacgaggtggtgcacggcaagggctcgctc
atcaacaagatgcccggcgacagctggcagcagttcgccaacctgagggcgctgttcggc
ttcatgtgggcgcacccgggcaagaagctgctcttcatgggcgacgagttcggccagcgc
cgcgaatggacgcacgacggcgagctcgaatggtgggtcacccagcagcagggccatggc
ggcctgcagcggctggtggcgcagctcaaccgggtttaccgagagtcgcccgcgctgcac
cagctcgacttctcggccgccggcttcgaatggatcgcggccgacgacgccgagcgcagc
gttttcgcctttctgcgcaaggcgcgcgacggcagcccgccgctgctggtggtcagcaac
atgacgcccgtgccgcgcaccaactacctgctgggcgtgcccggcggcgtgggcagcggc
ttctggcgcgaactgatcaacaccgacgcgaccgagttcggcggcgccggctggggcaac
ttcggcggcgtggaagccgcgccggtgcgctcgcacgggcgcatgcagtcggtgtccctg
acgctgccgccgctgtcgaccctgatcctggaacaacgcccgtcaccatga
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