Variovorax sp. PMC12: C4F17_02170
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Entry
C4F17_02170 CDS
T05380
Name
(GenBank) malto-oligosyltrehalose synthase
KO
K00705
4-alpha-glucanotransferase [EC:
2.4.1.25
]
K06044
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:
5.4.99.15
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00500
Starch and sucrose metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
Module
vam_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vam_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C4F17_02170
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
C4F17_02170
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.15 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase
C4F17_02170
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
Alpha-amylase
MalQ_N
Motif
Other DBs
NCBI-ProteinID:
AVQ79846
LinkDB
All DBs
Position
1:483440..488581
Genome browser
AA seq
1713 aa
AA seq
DB search
MLAALCEHYGIATAYHDAFGTRRQATTQSMLALLAEFGVRIGTAQDAHRALEAAHAMRWT
EALPHVRVVDASATEWSVPLRLPLAMRSLRWQLTDEAGRTRHGEADASTLHETARSERDG
IWLSERVLPMTLALDAGYHRLRIDGLAGETLVLASPGRCYRPPAVRDGGRVWGPAVQLYS
LRSQHNWGIGDFSDLQDLAARMAAQGADIVGVNPLHALFAANPAHASPYSPSSRQQLNAL
YIDVEAVDEFAQCEAARKLVDSPAFQARLAALRAEPLVDHAGVASAKFEVLELLFAHFRE
RHLPEDGAPDEEGLAFLSFVAERGEGLRQHALFETLHAHFLAADPAMWGWPVWPAAYRDP
DSAEVTAFAVQHAQRLQFHQYLQWQAARQLARAGERCAALGMGVGLYVDLAVSVDRAGSD
AWTAQSVFAAGASIGAPPDEFNPAGQNWGLPPLRPDRLRADGHRFFMQTLRASMHGAGAL
RIDHVMGLMRLFWIPPGRGAHDGAYVYYPLDELLAIVAIESHRHRCMVIGEDLGTVEDAV
REALGKADVLSYRLLYFERLDRHQGSGFKPPAAYPPAALVAVSTHDLATFAGWWAGHDLR
TRLSLGLFPDERVFDKQLLDRAQERIELMLAVQQAGLLSREEIAEAAGLALPTARVVEAV
HAWLARTPSALMMVQLEDVAGVVEQANMPGTVSEQPNWRRKLPVPLHALATGERMQGLAA
QLRAARPAIRPDAPQHAPQDLRARVPRATYRLQFHKDFGFDDAVRVLPYLAQLGVSHVYC
SPIQRARAGSMHGYDVVAHDEINPELGGEEGFARFVAALKAHGMGQLLDMVPNHMGVFGA
DNAWWMDVLENGPASLYAQHFDIDWQPLNVELTGKVLLPVLGGHYGEVLGSGELALRFEA
EEGAFAIGYFGHRFPLAPESYPTVLARALAQLDESADDAAALASIATAFGHLPGRQAAQP
QLRTERARDKELLKARLARLAQRHPSVAKAVATAVAELNLATPEARDAMHALIEAQAYRL
AYWRVASDEINYRRFFDINDLAAVRMERDDVFEATQSFALELAAAGTVDGLRIDHPDGLY
DPARYFEKLQQGYARRAGLALPAHDAQGRPARPLYVVAEKIAADNEEVPESWHVHGTTGY
RFANVANGVLVDTSAAETIGHAWRRFTGETQGFHALSQAGRREVMRNALSSELNVLSSEL
LRIARADRATRDYTLNALRRALADVAANMPVYRTYIVEKPSAQDERFIDEATQAAERQSG
DADRSVFAFVRGALRGEAVAGAPRELAERVRRFAVRFQQFSAPVTAKGVEDTAFYRFFPL
SSLNEVGGEPDHFGFEVDEFHALSADRALRWPHTMLATSTHDNKRSEDVRNRIDVLSEMP
NDWVLALTRWHGMCRDTRRKLETDDAPSRADEYLFYQTLLGTLPAGGLDAAEAPAFADRL
CQYMQKAAREAKLRTRWTQPDAAYEAALEGFVRGVIGNMEEGGCLADIQLFAKRLAWFGA
WNGLTLTLLKYASPGVPDLYQGSELIELSLVDPDNRRPVDYAGRQQRLHELQAMAADAPG
LAARVRALAASPHDGRAKLWFIWRLLSLRREHAELFRDGGYEGLAVEGALSRHVVAFARR
HGDEMLVVVSGRLFVGLASGNGGMPSLPEAGIWSDTAVQLPAELAGAQLQNLLTGETLHA
GQDASLPLAQAFGSIPWAAYKVRTPKHASRIPT
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcggcgctgtgcgaacactacggcattgccaccgcctaccacgatgccttcggc
acgcgccggcaggccacgacgcagagcatgctcgcgctgctggcggaattcggcgtgcgc
atcggcaccgcgcaggatgcccaccgcgccctcgaagccgcgcatgccatgcgctggacg
gaagccctgcctcatgtgcgggtggtcgatgcatcggccaccgaatggagcgtgcccctg
cgcctgccgctggccatgcgctcgctgcgctggcagctcaccgacgaagccggccgcacg
cggcacggcgaggccgatgcctccacgctgcacgagacggcgcgcagcgagcgcgacggc
atctggctgagcgaacgcgtgctgccgatgacgctcgcgctcgacgcgggctaccaccgg
ctgcgcatcgacgggctggccggcgagacgctggtgcttgcgtcgccgggccgctgctac
cggccgcccgcggtgcgggacggcggccgcgtctgggggccggcggtgcagctgtacagc
ctgcgctcgcagcacaactggggcatcggcgacttcagcgacctgcaggatctggcggcc
cgcatggccgcgcagggcgccgacatcgtcggcgtgaacccgctgcatgcgctgttcgcg
gccaatccggcgcatgcgagcccgtacagcccgtcgtcgcgccagcagctgaacgcgctc
tacatcgacgtcgaggcggtggatgaattcgcgcagtgcgaggccgcgcgaaagctggtc
gattcgcccgcgttccaagcgcgcctggccgcactgcgcgccgaaccgctggtggaccat
gcgggcgttgcatccgccaagttcgaagtgctggagctgctgttcgcgcacttccgcgag
cgccatctgccggaagacggcgcgccggacgaagagggcctggcgttcctgtcattcgtc
gcggagcgcggcgagggcttgcggcagcacgcgctgttcgagacgctgcatgcgcacttt
ctggcggcagatcccgcgatgtggggctggcccgtgtggcccgccgcatatcgagacccc
gattcggccgaggtcaccgcattcgccgtgcagcatgcgcaacgcctgcagttccaccag
tacctgcaatggcaggctgcgcggcaactggcgcgggctggcgaacgctgcgccgccctg
ggcatgggcgtgggtctctacgtggacctggcggtgtcggtcgaccgtgccggttccgat
gcctggacggcgcagtccgtgttcgcggccggtgccagcatcggcgcgccgcctgacgag
ttcaaccccgccggccagaactggggcctgccgccgctgcgtcccgaccggctgcgcgcg
gacggccaccgcttcttcatgcagacgctgcgcgcgagcatgcacggcgcgggcgccttg
cgcatcgatcacgtcatggggctcatgcgcctgttctggataccgccgggccgcggcgcg
catgacggcgcgtatgtgtactacccgctggacgagctgctcgccatcgtcgccatcgag
agccatcgccaccgctgcatggtgatcggcgaagacctgggcacggtggaagacgcggtg
cgagaggcgctgggcaaggccgacgtgctgtcttaccgcctgctgtacttcgagcgtctc
gaccggcaccagggcagcggcttcaagccgccggccgcgtatccgccggccgcgctggtg
gccgtgagcacgcacgacctcgcgacattcgccggctggtgggccggccacgacctgcgc
acccggctgtcgctgggcctgttccccgacgagcgcgtcttcgacaagcaactgctcgac
cgcgcgcaggagcgcatcgagctgatgctggccgtgcagcaggccggcctgctgtcgcgc
gaggagatcgccgaggccgcgggcctcgcactgcccacagcgcgtgtggtggaggcggtg
catgcctggctcgcgaggacgccgtcggcattgatgatggtgcagctcgaagacgtggcg
ggcgtggtcgagcaggccaacatgcccggcacggtgagcgagcagcccaactggcggcgc
aagctgccggtgccgctgcacgcgctggccacgggcgagcgcatgcaggggctggccgcg
caactgcgcgccgcgcgccccgcgatccgacccgatgcgccgcagcacgcgccgcaagac
ctgcgcgcccgcgtgccgcgcgccacctaccggctgcagttccacaaggacttcggcttc
gacgacgcggtgcgcgtgctgccgtacctcgcgcaactgggcgtgagccacgtctactgc
tcgccgatccagcgcgcgcgcgccggcagcatgcacggctacgacgtggtggcgcacgac
gagatcaaccccgagctgggcggcgaagaaggctttgcgcgcttcgtcgcggcgctcaag
gcgcacggcatgggccagctgctggacatggtgcccaaccacatgggcgtgttcggcgcc
gacaacgcatggtggatggacgtgctggagaacggcccggcctcgctctacgcgcagcac
ttcgacatcgactggcagccgctgaacgtcgagctcacgggcaaggtgctgctgccggtg
ctcggcgggcactacggcgaggtgctcggcagcggcgaactggcgctgcgcttcgaggcg
gaagagggcgccttcgcgatcggctatttcggccatcgctttccgctcgcgcccgagagc
tatcccacggtgctggcgcgagccctcgcgcagctcgacgaatccgccgacgacgcggcg
gcgctcgcgagcatcgccaccgctttcggccaccttccggggcggcaggctgcgcagccg
cagttgcgcaccgagcgcgcgcgcgacaaggaactgctgaaggcccgcctcgcacgcctg
gcgcagcgccatccttcggtcgcgaaggcggtggcgacggccgtggccgagctgaacctg
gccacgcccgaagcgcgtgacgccatgcatgcgctgatcgaggcccaggcctaccggctg
gcctactggcgcgtggcctcggacgagatcaactaccgccgcttcttcgacatcaacgac
ctcgcggccgtgcgcatggagcgcgacgacgtgttcgaggccacgcagtccttcgcgctc
gagctcgcggcggcgggcacggtggacggcttgcgcatcgaccaccccgacggcctctac
gaccccgcgcgctacttcgagaagctgcagcagggctacgcgcggcgcgcggggcttgca
ttgcccgcgcacgatgcgcaaggcaggccggcccggccgctctacgtggtggccgagaag
atcgcggcggacaacgaagaagtgcccgagagctggcacgtgcacggcaccaccggctac
cgcttcgcgaacgtggccaacggcgtgctggtcgatacctcggccgccgagaccatcggc
catgcgtggcgccgcttcaccggcgagacccagggctttcatgcgctctcgcaggccggc
cggcgcgaggtgatgcgcaatgcgctgtcgtcggaactcaacgtgctttcaagcgagctg
ctgcgcatcgctcgggccgaccgtgccacgcgcgactacacgctcaatgcgctgcgccgc
gcgctggccgacgtggcggccaacatgccggtgtaccgcacctacatcgtcgagaagccc
tcggcgcaggacgaacgcttcatcgacgaagccacgcaggcggccgaacggcagagcggc
gatgccgaccgctcggtcttcgccttcgtgcgcggcgcgctgcgcggcgaagccgtggcg
ggtgcgccgcgcgagctggccgagcgggtgcgtcgctttgcggtgcgcttccagcagttc
agcgcgccagtcacggccaagggcgtggaagacacggcgttctatcgcttcttcccgttg
agttcgctcaacgaggtgggcggcgagcccgaccacttcggcttcgaggtggacgagttc
catgcgctcagcgccgaccgcgcgctgcgctggccgcacaccatgctcgccacgtcgacg
cacgacaacaagcgctccgaagacgtgcgcaaccgcatcgacgtgctctccgaaatgccc
aacgactgggtgctggcgctgacccgctggcacggcatgtgccgcgacacgcggcgcaag
ctggagacagacgacgcaccgtcgcgcgccgacgaataccttttctaccagacgctgctg
ggcacgctgccggcaggcggcctcgacgccgccgaagcgccggccttcgccgaccggctc
tgccagtacatgcagaaggccgcgcgcgaagccaagctgcgcacgcgctggacccagccc
gacgcggcctacgaggccgcgctcgaaggcttcgtgcggggcgtgatcggcaacatggaa
gagggcggctgcctggccgacatccagctcttcgcgaaacggcttgcctggttcggcgca
tggaacgggctgacgcttacgctgctgaagtacgcatcgccgggcgtgcccgacctctac
caaggcagcgagctgatcgagctgagcctcgtggatccggacaaccgccggcccgtggac
tacgcggggcggcagcagcggctccatgaactgcaggccatggccgccgatgcgccgggc
ctcgccgcgcgggtgcgtgcgctggctgcgtcgccgcacgacgggcgcgccaagctgtgg
ttcatctggcgtctgctgtcgctgcggcgcgagcatgcggagctgtttcgcgatggcggg
tacgaagggctggctgtggaaggcgcgttgtcgcgccatgtcgtggcctttgcgcggcgc
catggagacgagatgctggtggttgtgtcggggcggctgttcgtcggtttggcatccggc
aacggcggcatgccttcgttgcctgaggccggcatctggagcgacacggcggtgcaactg
ccggcagagctggcaggcgcgcagcttcagaacctgctgaccggcgaaacgctgcacgcg
ggccaggatgcatcgctgccgctggcccaggcgttcggaagcatcccgtgggccgcttac
aaggtgcgcactcctaaacatgcgagccgcattcctacatga
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