Variovorax sp. PMC12: C4F17_02535
Help
Entry
C4F17_02535 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K23536
general nucleoside transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_02535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_02535
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_02535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ79915
LinkDB
All DBs
Position
1:complement(562728..563630)
Genome browser
AA seq
300 aa
AA seq
DB search
MTDTLVSILISGTPLVYVTLAGVLAQRAGIWNLGLEGLMIIGSCALIVGIVQTGSFAQAM
LIAAGLCVAASALLWWVVERLKANPIIAGLGLTGLGLGGTSLAIQALYDSEATVTAPFGI
PKLNSLTSVDLGAFGGLSVFVLFMPVAVWLVWLLLERTRLGLQMSASGEHPFAARSVGVN
PGRMRLLALALGGVLCAIGGAELAGGSLQIFSQNMTAGRGFMAFAAVIFGAGSALGATGA
ALFFAVVSALGIRAQLMYGGAISNDLLQSLPYLATIFGVWLSTKLRGGLGSIRGTAEMRD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacgctcgtctccatcctgatctccggcacgccgctggtctatgtcacgctg
gcgggcgtgctggcgcagcgcgcgggcatctggaacctcggcctggagggcctgatgatc
atcggcagctgcgcgctcatcgtcggcatcgtgcagaccggctcgttcgcccaggccatg
ctgatcgccgcggggctgtgcgtggcggcgtcggcgctgctgtggtgggtggtcgagcgg
ctcaaggccaacccgatcatcgcggggctgggcctgacggggctgggcctcggcggcacc
tcgctcgccatccaggcgctgtacgacagcgaagccacggtgactgcgccgttcggcatt
cccaagctcaacagcctgaccagcgtcgacctgggcgcattcggcggcctctcggtgttc
gtgctgttcatgcccgtggcggtgtggctggtgtggctgctgctggaacgcacccggctg
ggcctgcagatgtcggcctcgggcgagcacccgttcgcggcgcgcagcgtgggcgtgaac
ccggggcgcatgcgcctgctggcgctggcgctcggcggcgtgctgtgcgccatcggcggt
gcggagctggccggcggcagcctgcagatcttctcgcagaacatgacggcgggccgaggc
ttcatggcgttcgcggcggtgatcttcggcgccggcagcgcactcggcgccaccggggcg
gcactgttcttcgcggtggtttccgcgctgggcatccgcgcccagctgatgtatggcggc
gccatttccaacgacctgctgcagtcgttgccctaccttgcgaccatcttcggcgtgtgg
ctgagcaccaagctgcgcggcgggctgggctccatcaggggcacggccgagatgcgcgac
tga
DBGET
integrated database retrieval system
