Variovorax sp. PMC12: C4F17_02540
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Entry
C4F17_02540 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K23535
general nucleoside transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_02540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_02540
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_02540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
HCV_core
Motif
Other DBs
NCBI-ProteinID:
AVQ79916
LinkDB
All DBs
Position
1:complement(563627..564661)
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AA seq
344 aa
AA seq
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MTASRMLPVLRVVVFVCFALLLCALAFMGAGLDAGELFTGILDGAFLRDGALHQGLRWAM
PLFITATGVAIAFRAGFFNIGAQGQFYVGSIFAAFTAEWLAGGPAWLVVACCLLAGMLGG
ALWAMWPGLLRLRSGTDEVITTLMGNFLAGLLLVYVTSGPLKDPTGSGQQASSRPIADAY
RISDSLGVSPLIVVLTLLVFALSWLLANRTALGIVANLAGRNPTMVSWQGARVGRIGLFS
FLVSGALAGLAGGIELLGPNGRLASGFLPAHGFTAILIALVAQLTIVGTAVSALFFGALA
SAALYLPVMAGMPAAAIEVINATIALFITSRAKWLDKLLTRKPA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctctcgcatgctgcccgtgctgcgggtggtggtcttcgtctgcttcgcgctg
ctgctgtgcgcgctggccttcatgggcgccgggctcgacgcgggcgagctgttcaccggt
atcctcgacggcgccttcctgcgcgacggggccctgcaccagggcctgcgctgggccatg
ccgctgttcatcaccgccaccggcgtggccatcgcgttccgcgcgggcttcttcaacatc
ggcgcccaggggcagttctatgtcggctccatcttcgcggcgttcaccgccgagtggctc
gcgggcggtccggcctggctggtcgtcgcctgctgcctgctcgcgggcatgctgggcggc
gcgctgtgggccatgtggccgggcctgctgcgcctgcgctcgggcaccgacgaggtcatc
accacgctgatgggcaacttcctggcaggcctgctgctggtgtacgtgacctccgggccg
ctgaaagacccgacgggctcgggacagcaggcatcgagccggcccattgccgacgcctac
cgcatctccgattcgctgggcgtgtcgccgctgatcgtggtgctcacgctgctggtgttc
gcgctgtcgtggctgctggccaaccgcacggcgctgggcatcgtcgccaacctcgcgggg
cgcaacccgaccatggtgtcgtggcagggtgcgcgggttgggcgcatcggcctcttcagc
ttcctggtgagcggcgcgctggccgggctggccggcggcatcgagctgctgggccccaac
gggcggctggccagcggcttcctgcccgcgcacggcttcacggccatcctgatcgcgctg
gtcgcgcagctcaccatcgtcggcaccgccgtgtccgccctcttcttcggtgcgctggca
tcggccgcgctctacctgccggtgatggccggcatgcccgcggcggccatcgaggtcatc
aacgccaccatcgccctgttcatcacgtcccgcgccaagtggctggacaagctcctgacc
cgaaagcccgcatga
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