Variovorax sp. PMC12: C4F17_02770
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Entry
C4F17_02770 CDS
T05380
Symbol
bioB
Name
(GenBank) biotin synthase BioB
KO
K01012
biotin synthase [EC:
2.8.1.6
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00780
Biotin metabolism
vam01100
Metabolic pathways
vam01240
Biosynthesis of cofactors
Module
vam_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
C4F17_02770 (bioB)
Enzymes [BR:
vam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.6 biotin synthase
C4F17_02770 (bioB)
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Gene cluster
GFIT
Motif
Pfam:
BATS
Radical_SAM
FGAR-AT_PurM_N-like
CofH_C
Motif
Other DBs
NCBI-ProteinID:
AVQ79957
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Position
1:617252..618289
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AA seq
345 aa
AA seq
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MGANDLQQAITLHRPAKAAAPRAEGRWSVEAIQALLDKPLMDLLFEAQTVHRKHFPEGDI
ELATLLSVKTGGCPENCGYCPQSAEFDTGVKAQKLMEVDEVVRAAQAAKDAGATRFCMGA
AWRAPKDRDVEKVAVLVEAVKGLGMQTCATLGMLEPHHAHQLKAAGLDYYNHNLDTAPEY
YTDVVDTRTYQDRLDTLANVRSAGISVCCGGIVGMGEQPVHRAGLIAQLANLNPYPESVP
INSLVRVPGTPLADSDPVDPFDFVRMIAVARITMPTARVRLSAGRQQMGDAVQALCFMAG
ANSIFYGDKLLVTGNPDVEADTVLLRKLGLNARQVQEQASESCAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaacgacttgcaacaggcgatcacgctgcaccggcccgcgaaggccgctgcc
cccagggccgagggccggtggtccgtcgaggcgatccaggcgctgctcgacaagccgctg
atggacctgctgttcgaggcgcagaccgtgcaccgcaagcatttccccgaaggcgacatc
gagctggccacgctgctgtcggtcaagaccggtggctgtccggagaactgcggctactgc
ccgcagtcggccgagttcgataccggcgtgaaggcgcaaaagctcatggaggtcgacgag
gtggtgcgcgccgcgcaggccgccaaggacgccggcgccacgcgcttctgcatgggcgcc
gcatggcgagcgcccaaggaccgcgacgtggagaaggtggccgtgctggtagaggcggtg
aagggcctgggcatgcagacctgcgccacgctcggcatgctggagccgcaccatgcgcac
cagctcaaggccgccggcctcgactactacaaccacaacctcgacaccgcgcccgagtac
tacaccgacgtggtcgacacgcgaacctaccaggaccggctcgacacgctggccaacgtg
cgcagcgcgggcatcagcgtgtgctgcggcggcatcgtgggcatgggcgagcagccggtg
caccgcgcggggctgatcgctcagctggccaacctgaacccgtacccggaatcggtgccg
atcaacagcttggtgcgcgtgcctggcacgccgctggcggactcggacccggtcgaccca
ttcgacttcgtgcgcatgatcgcggtcgcgcgcatcaccatgcccaccgcgcgcgtgcgt
ctgtcggccgggcgccagcagatgggcgacgcggtgcaggcgctgtgcttcatggcgggc
gcgaactcgatcttctatggcgacaagctgctggtcaccggcaaccccgacgtggaagcc
gacacggtgctgctgcgcaagctcgggctcaacgcgcggcaggtccaggaacaggcttcc
gaaagctgcgccgcatga
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