Variovorax sp. PMC12: C4F17_02780
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Entry
C4F17_02780 CDS
T05380
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_02780
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_02780
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
C4F17_02780
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
C4F17_02780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
MarR
HTH_20
HVO_A0114
HTH_1
HTH_11
HTH_Crp_2
HTH_5
NirdL-like_HTH
GvpO
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-ProteinID:
AVQ79959
LinkDB
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Position
1:complement(618767..619264)
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AA seq
165 aa
AA seq
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MNFALNPSLDAHDTRILAELQNDARLTMAELGRRVHLSQPAVTERVKKLEAAGVISGYRA
TVNLGKLGYGIRAIIRVGRADYARVVELVQQTPECVNAYNVTGEDSWILEIAVIDVSHLD
AVVTKFCILTETATSIILNPAREHQAMLPPRSSDVKPPIKKVLNA
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccttgaacccctcactggatgcgcacgacacccgcatcctggccgaactg
cagaacgatgcgcggctgaccatggccgaactcggccgccgcgtgcacctgagccagccc
gcggtgaccgagcgcgtgaagaagctggaggccgcgggcgtcatcagcggctaccgtgcc
accgtgaacctgggcaagctgggctacggcatccgcgccatcatccgcgtgggccgcgcc
gactacgcacgcgtggtcgagctggtgcagcagacgcccgaatgcgtcaatgcctacaac
gtgaccggggaagacagctggatcctggagatcgcggtgatcgacgtgagccacctcgat
gcggtggtcaccaagttctgcatcctcaccgagaccgccacctcgatcatcctgaacccg
gcgcgagagcaccaggcgatgctgccgcccaggagctcggacgtgaagccgccgatcaag
aaagtgctcaacgcgtag
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