Variovorax sp. PMC12: C4F17_02930 Help Entry C4F17_02930       CDS       T05380                                  Symbol lpdA Name (GenBank) dihydrolipoyl dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism vam  Variovorax sp. PMC12 Pathway vam00010   Glycolysis / Gluconeogenesis vam00020   Citrate cycle (TCA cycle) vam00260   Glycine, serine and threonine metabolism vam00280   Valine, leucine and isoleucine degradation vam00310   Lysine degradation vam00380   Tryptophan metabolism vam00620   Pyruvate metabolism vam00630   Glyoxylate and dicarboxylate metabolism vam00640   Propanoate metabolism vam00670   One carbon pool by folate vam00785   Lipoic acid metabolism vam01100   Metabolic pathways vam01110   Biosynthesis of secondary metabolites vam01120   Microbial metabolism in diverse environments vam01200   Carbon metabolism vam01210   2-Oxocarboxylic acid metabolism vam01240   Biosynthesis of cofactors Module vam_M00009   Citrate cycle (TCA cycle, Krebs cycle) vam_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate vam_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA vam_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:vam00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     C4F17_02930 (lpdA)    00020 Citrate cycle (TCA cycle)     C4F17_02930 (lpdA)    00620 Pyruvate metabolism     C4F17_02930 (lpdA)    00630 Glyoxylate and dicarboxylate metabolism     C4F17_02930 (lpdA)    00640 Propanoate metabolism     C4F17_02930 (lpdA)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     C4F17_02930 (lpdA)    00280 Valine, leucine and isoleucine degradation     C4F17_02930 (lpdA)    00310 Lysine degradation     C4F17_02930 (lpdA)    00380 Tryptophan metabolism     C4F17_02930 (lpdA)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     C4F17_02930 (lpdA)    00670 One carbon pool by folate     C4F17_02930 (lpdA)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vam04147]     C4F17_02930 (lpdA) Enzymes [BR:vam01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      C4F17_02930 (lpdA) Exosome [BR:vam04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    C4F17_02930 (lpdA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Thi4 FAD_binding_2 AlaDh_PNT_C Biotin_lipoyl_2 Pyr_redox_3 NAD_binding_8 HI0933_like FAD_binding_3 DAO GCV_H DEC-1_N RnfC_N Lycopene_cycl Motif Other DBs NCBI-ProteinID:  AVQ79988 LinkDB All DBs Position 1:649952..651790 Genome browser AA seq 612 aa AA seqDB search MSEQQIKVPDIGDFDEVAVIEVLVNVGDTVKAEQSLITVESDKASMEIPSSAAGVVKALA VKVGDKVKEGSVVLTLEVDGAAAAAPAAAAPAPAAAAAPSAAPAPKAAPAPAPASAAVAV SSYGGKVDVECDVVVLGAGPGGYSAAFRAADLGLKVVLIERYATLGGVCLNVGCIPSKAL LHVASVMDEVKHFADLGVSFAAPTVDRAKLLGHKNKVVGKLTSGLTAMAKMRKVTVLRGV GNFIDPYHLEVDETSGTSWDTTGSKQTVKFRNAIIAAGSQAVSLPFMPKDPRVVDSTGAL EMGTDPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKMNAPR FDNIMLKTKTVGAEATKEGIKVSFEGENAPKEPQVYDLVLQAVGRSPNGKKIGAEKAGVT VSDRGFIPVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGEQKGDKELSSA AFNARVIPSVAYTDPEVAWVGLTEDQAKTEGIKVKKGHFPWSASGRAIANGRDEGFTKLL FDAETHRILGGGIVGTHAGDMLGEIALAIEMGADEIDIGKTIHPHPTLGESIGMAAEVAH GTCTDLPPARKS NT seq 1839 nt NT seq  +upstreamnt  +downstreamnt atgagcgaacaacaaatcaaggtgcccgacatcggcgacttcgacgaagtcgcggtgatc gaggtgctggtcaatgtcggagacacggtcaaggccgagcagtcgctgatcacggtcgaa tcggacaaggcctcgatggagattccgtcgtccgccgccggcgtggtgaaggcgctggcc gtgaaggtgggcgacaaggtcaaggaaggctctgtcgtgctgacgctggaagtcgacggc gccgccgcggccgcccccgctgccgcagcaccggctcccgctgccgccgccgcacccagt gcagcccccgcgcccaaggccgcaccggcgccggcccccgcttcggcggccgtggccgtg tcgagctacggcggcaaggtcgatgtcgaatgcgacgtggtcgtgctcggcgcaggcccc ggcggctattcggcagccttccgcgcggccgacctcggcctgaaggtcgtgctgatcgag cggtacgccaccctcggcggcgtgtgcctgaatgtcggctgcatcccgtcgaaggcgctg ctgcacgtggcgtcggtcatggacgaggtcaagcacttcgcggacctgggcgtgagcttt gccgctcccacggtcgaccgcgccaagctgctgggccacaagaacaaggtggtgggcaag ctcaccagcggcctcacggccatggccaagatgcgcaaggtgacggtgctgcgcggcgtc ggcaatttcatcgacccgtaccacctggaggtcgacgaaacctcgggcaccagctgggac accacgggcagcaagcagaccgtcaagttccgcaacgccatcatcgcggccggctcgcag gccgtgagcctgcccttcatgccgaaggacccgcgcgtggtcgactcgaccggcgcgctc gagatgggcaccgaccccaagcgcatgctgatcctgggcggcggcatcatcggcctggag atgggcacggtgtattcgacgctgggcgcacgcctggacgtggtcgaaatgctcgacggc ctgatgcagggcgccgaccgcgacctggtcaaggtctggcagaagatgaatgcgccgcgc ttcgacaacatcatgctgaagacgaagacggtcggcgccgaggccacgaaggaaggcatc aaggtcagcttcgagggcgagaacgcgccgaaggagccgcaggtgtacgacctggtgctg caggccgtgggccgcagccccaacggcaagaagatcggcgccgagaaggccggcgtcacg gtgagcgaccgcggcttcataccggtcgacatccagatgcgcaccaacgtgccgcacatc ttcgccatcggcgacatcgtgggccagcccatgctggcgcacaaggcggtgcacgaggca cacgtggcggccgaagtgatcgcaggcgagcagaagggcgacaaggagctgtccagcgcc gccttcaacgcccgggtgatcccgagcgtggcctacaccgaccccgaggtggcgtgggtc ggcctgaccgaggaccaggccaagaccgagggcatcaaggtcaagaaggggcacttcccg tggtcggcatcgggccgcgccatcgccaacggccgcgacgagggcttcaccaagctgctg ttcgacgccgagacgcaccgcatcctgggcggcggcatcgttggcacgcacgccggcgac atgctcggcgagattgcactcgccatcgagatgggcgccgacgaaatcgacatcggcaag accatccacccgcacccgacgctgggcgaaagcatcggcatggcggcggaagtggcgcac ggcacctgcaccgacctgccgccggcccgcaagagctga

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