Variovorax sp. PMC12: C4F17_02960
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Entry
C4F17_02960 CDS
T05380
Name
(GenBank) propionate--CoA ligase
KO
K01908
propionyl-CoA synthetase [EC:
6.2.1.17
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00640
Propanoate metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C4F17_02960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vam01004
]
C4F17_02960
Enzymes [BR:
vam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.17 propionate---CoA ligase
C4F17_02960
Lipid biosynthesis proteins [BR:
vam01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
C4F17_02960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ACAS_N
Motif
Other DBs
NCBI-ProteinID:
AVQ79994
LinkDB
All DBs
Position
1:656716..658629
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AA seq
637 aa
AA seq
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MSRFEEFHRQSVDAPEAFWAEQARLIDWHTPAQQILDASQPPFARWFVGGTTNLCHNAVD
RHLAERGSQPALIFVSTETGVEKSYSFDELHAEVQRTAASLVELGVGKGDRVLIYMPMIP
EAAFAMLACARIGAIHCVVFGGFASVSLATRIEDAEPKVVVSADAGSRGGKVIAYKPLLD
EAIRLSKHKPSAVLLTDRGLAPMDLTAGRDHLAADLRQKHIDAKVPCTWLASTDISYTIY
TSGTTGKPKGVQRDVSGYAVALAASMKHIFDGRAGETYFSTSDIGWVVGHSYIVYGPLIA
GMATIMYEGLPTQGIDRQPDGGIWWRLVEKYKVTVMFSAPTAVRVLKKQDPALLKKYDLS
SLRALFLAGEPLDEPTARWISEGLGVPIIDNYWQTESGWPMITIANGVEAKASKFGSPGV
PMYGYRIKILHESTGEELTGANEKGVVVVEGPTPPGFMQTVWKDDARFVDTYWKSVPGKM
VYSTFDWGIRDEDGYFYILGRTDDVINVAGHRLGTREIEESISGHANVAEVAVVGVADAL
KGQVAMAFVVPKDGKAVADADLALKLEGEIMKLVADQLGALARPARVRFVSGLPKTRSGK
LLRRAIQAVCEQRDPGDLTTIDDPATLQQIKQLLSAP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctttgaagagttccatcgccagtcagtggatgcgcccgaggccttctgggcc
gagcaggcccggctgatcgactggcacacccccgcgcagcagatccttgacgccagccag
ccgccgttcgcgcgctggttcgtgggcggcaccaccaacctgtgccacaacgccgtcgac
cggcaccttgccgagcgcggcagccagcccgcgctgatcttcgtctccacagaaaccggc
gtcgaaaagagctacagcttcgacgagctgcacgccgaagtgcagcgcaccgccgccagc
cttgtcgagctcggtgtcggcaagggcgaccgggtgctcatctacatgccgatgattccc
gaggccgcgttcgccatgctggcctgcgcgcgcatcggcgccatccactgcgtggtgttc
ggcggcttcgcgagcgtttcgctggccacgcgcatcgaagatgccgagcccaaggtggtc
gtgagtgccgatgccggctcgcgcggcggcaaggtcatcgcgtacaagccgctgctcgac
gaggcgatccgcctgtcgaagcacaagccctcggccgtgctgctcaccgaccgcggcctc
gcacccatggacctgacggcagggcgcgaccacctcgccgccgacctgcgccagaagcac
atcgacgccaaggtgccctgcacctggctcgcctcgaccgacatcagctacaccatctac
acgagcgggaccaccggcaagcccaagggcgtacaacgcgacgtgagcggctacgcagtg
gcgctggccgcgagcatgaagcacatcttcgacgggcgggctggcgaaacctacttctcg
accagcgacatcggctgggtcgtgggccacagctacatcgtgtacggcccgctgatcgcg
ggcatggcgaccatcatgtacgaaggcctgcccacccagggcatcgaccggcagcccgac
ggcggcatctggtggcgcctcgtcgagaagtacaaggtgacggtgatgttcagcgcgccc
accgcggtgcgcgtgctcaagaagcaggacccggccctgctcaagaagtacgacctgtcc
agcctgcgcgcgctgttcctggccggcgagccgctcgacgagcccaccgcccgctggatc
agcgagggcctgggcgtgccgatcatcgacaactactggcagaccgaatcgggctggccg
atgatcaccatcgccaatggcgtggaggccaaggccagcaagttcggcagtccgggcgtg
ccgatgtacggctaccgcatcaagatcctgcacgagtcgaccggcgaggaactgaccggc
gcgaacgagaaaggcgtggtcgtggtggaggggccgaccccgcccggtttcatgcagacc
gtgtggaaggacgacgcgcgcttcgtcgatacctactggaaaagcgtacccggcaagatg
gtctattcgaccttcgactggggcattcgcgatgaagacggctatttctacatcctcggg
cgcaccgacgacgtgatcaacgtggcgggccaccgactgggcacgcgcgagatcgaggag
agcatttcgggccatgccaacgtcgcggaagtggccgtggtgggcgttgccgacgcgctc
aaggggcaggtggcgatggccttcgtcgttccgaaggacggcaaggccgtggccgacgcc
gacctggcgctcaagctcgagggcgagatcatgaagctggtggccgaccagctcggcgcg
ctggcccgtcccgcgcgcgtgcgcttcgtgagcggcctgcccaagacgcgcagcggcaaa
ttgctgcgccgcgccatccaggccgtctgcgagcagcgcgacccgggcgacctgaccacc
atcgacgaccccgccacgctgcagcagatcaaacagttactttctgcgccctga
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