Variovorax sp. PMC12: C4F17_03015
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Entry
C4F17_03015 CDS
T05380
Symbol
scpB
Name
(GenBank) SMC-Scp complex subunit ScpB
KO
K06024
segregation and condensation protein B
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_03015 (scpB)
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
C4F17_03015 (scpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_ScpB
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
AVQ80004
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Position
1:671580..672383
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AA seq
267 aa
AA seq
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MNTADAKRILETALICSSQPLPVRDMRVLFDDELGVDTIKVLLLELQEDWAQRGLELVSV
GSGWRFQSRPEMRDHLDRLHPEKPPRYTRAALETLAIIAYRQPATRGDMEDIRGVTINSL
ILKQLEDRGWVEVIGHRETVGRPALYATTRQFLDDLGLASLDQLPLIETPAQQAALVDAL
EQVSGEQQGLPMDPVDEPVTAEVLSEAAEAVEAAQAQVAENAAAADESEAPLAAETVLAQ
EPEQPQEPDGPSDDEADPEAVSPGKTS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggcggatgccaagcgcattctcgaaaccgccttgatctgttcgagccagccg
ctgccggtgcgcgacatgcgcgtgctgttcgacgacgagctgggcgtggacaccatcaag
gtgctgttgcttgaattgcaggaagactgggcgcagcgcggcctggagcttgtgagcgtc
ggcagcggctggcgtttccagagccggcccgagatgcgcgatcatctcgaccgcctgcac
cccgagaagccgccgcgctacacgcgcgccgccctcgagaccctggccatcatcgcgtac
cgccagcccgcgacgcgcggcgacatggaagacatccgcggcgtgacgatcaactcgttg
atcctcaagcagcttgaggaccgcggttgggtcgaggtgatcggccaccgcgaaaccgtc
ggcaggccggcgctgtacgcgaccacgcgccaattcctggacgacctcgggctggcgtcg
ctcgaccagctgccgctgatcgagacgccggcgcagcaggccgccctggtcgacgcgctc
gagcaggtgtcgggcgagcagcaggggctgccgatggaccccgtcgacgagcccgtgacg
gcggaagtgctgtccgaggctgccgaagccgtggaggccgcgcaggcgcaagtcgccgaa
aacgccgccgccgccgatgaatccgaggcgcctttggccgccgagaccgttctggcccaa
gagcccgaacaaccacaagaacccgacggtccgtccgatgacgaggccgatcccgaagca
gtttctcccggaaaaacctcatga
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