Variovorax sp. PMC12: C4F17_03030
Help
Entry
C4F17_03030 CDS
T05380
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vam03009
]
C4F17_03030 (rlmN)
Enzymes [BR:
vam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
C4F17_03030 (rlmN)
Ribosome biogenesis [BR:
vam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4F17_03030 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AVQ80007
LinkDB
All DBs
Position
1:674774..675922
Genome browser
AA seq
382 aa
AA seq
DB search
MTTANLLEFDLEGLAAFCEKLGEKKFRATQLFRWIHQRGASDFTQMTDLAKSLREKLATT
ARVEALSVLTQHESKDGTIKWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCS
TGHQGFSRNLTTGEIVAQLWFAEHFLRKHLKRDERVISNVVMMGMGEPLQNYSALVPALR
TMLDDNAYGLSRRRVTVSTSGVVPMIDRLGADCPVAMAVSLHAPNDALRDDLVPLNRKYP
IAELLEACKRYLAHAPRDFITFEYCMLDGVNDQPEHARQLIELVRTSGVSCKFNLIPFNP
FPASGLLRSPQPRVLAFARMLSEAGLVTTVRKTRGDDIDAACGQLAGDVKDRTRAAERMA
QRRATERPIVLHPVRKTVPQEH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggccaatctgctcgaattcgatctcgaggggttggccgcgttctgcgaaaaa
ctcggcgagaaaaaattccgcgccacgcaactgttccgctggatccaccagcgtggcgcc
agcgacttcacccagatgacagatctggccaagtcgctgcgcgagaaactcgcgaccacc
gctcgcgtcgaggccctgtcggtcctcacgcagcacgaatccaaggacggcacgatcaag
tggctgttcgacgtcggcgacggcaatgccgtcgaagccgtattcattcctgaagacgat
cgcggcaccctgtgcgtgtcgtcccaggccggctgtgcggtcggatgccgcttctgctcg
accgggcaccagggcttcagccgcaacctcaccacgggcgaaatcgtcgcccagttgtgg
ttcgccgagcacttcctgcgcaagcacctcaagcgcgacgagcgtgtcatctccaacgtg
gtgatgatgggcatgggcgagccgctgcagaactattccgcgctggtgccggcgctgcgc
accatgctcgatgacaacgcctatggcttgtcgcgccgtcgcgtgacggtgtcgacttcc
ggggtggtgcccatgatcgaccgcctcggcgccgattgcccggtggcgatggccgtgtcg
ctgcacgcgcccaacgacgcgctgcgcgacgatctcgtgccgctcaaccgcaagtacccg
atcgccgagttgctcgaggcgtgcaagcgctacctggcgcacgcgccgcgcgacttcatc
accttcgagtactgcatgctcgacggcgtcaatgaccagccggagcatgcgcgccagctg
atcgagcttgttcgcaccagtggcgtgtcgtgcaagttcaacctgatcccgttcaatccg
ttcccggcctcgggcctgctgcgttcgccgcagccgcgcgtgctggcattcgccaggatg
ctgagcgaagcgggcctggtgaccacggtgcgcaagacgcgcggcgacgacatcgacgcc
gcctgcggccagcttgccggcgacgtcaaggaccgcacccgcgcagccgagcgcatggcc
cagcgtcgcgcgaccgagcgtcccattgttttgcatccggtccgcaagaccgttccccag
gagcactga
DBGET
integrated database retrieval system
