Variovorax sp. PMC12: C4F17_03035
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Entry
C4F17_03035 CDS
T05380
Name
(GenBank) type IV pilus biogenesis/stability protein PilW
KO
K02656
type IV pilus assembly protein PilF
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vam02044
]
C4F17_03035
02035 Bacterial motility proteins [BR:
vam02035
]
C4F17_03035
Secretion system [BR:
vam02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C4F17_03035
Bacterial motility proteins [BR:
vam02035
]
Pilus system
Pilus assembly proteins
C4F17_03035
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_16
TPR_19
TPR_12
TPR_11
TPR_1
TPR_14
TPR_8
TPR_9
TPR_CcmH_CycH
TPR_20
TPR_Slam
TPR_15
TPR_21
HemY_N
Coatomer_E
BTAD
Motif
Other DBs
NCBI-ProteinID:
AVQ80008
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Position
1:675927..676781
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AA seq
284 aa
AA seq
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MSMAFPMTTASAQRMLAASFAGVAVTFLLAGCVSTRTTTTSLADTSSGKGVDIVTESDES
SRQRRARLRMELASGYFEQGQTNVALDEIKQALAADPNNADAYNLRGLVYMRLDDAGMAE
DSFRRAIAINPRDPNTRHNYGWLLCQQNRYGDAATQFNEALAVPSYPDRAKTLMTRGVCE
LRAGQRAQAERTLQQAYEIDAGNPVVGFNLALVLSQREEWSRAQFYIRRVNNSPSASAET
LWLGIKIERKLNNREAVAQLGGQLQRRFPQSREASAYERGNFND
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggcttttccgatgacgaccgctagcgcgcagcgaatgctggccgcgagcttt
gccggcgtcgccgtgacttttctgctcgccggttgcgtcagcacgcgcaccaccaccacg
agcctggccgacaccagttcgggcaagggcgtggacatcgtcaccgagtcggacgaaagc
tcgcgtcagcgccgcgcgcgcctgcgcatggaactggcatcgggctatttcgagcagggc
cagaccaacgtcgcgctcgacgagatcaagcaggcgctcgccgccgaccccaacaatgcg
gacgcgtacaacctgcgcggcctggtctacatgcggctcgacgacgccggcatggccgaa
gacagcttccgccgtgccatcgccatcaatccgcgcgaccccaacacgcgccacaactac
ggctggctgctgtgccagcagaaccgctacggcgacgcggcaacccagttcaacgaggca
ctcgccgtgcccagctatcccgaccgcgccaagacgctcatgacgcgcggcgtctgcgag
ctcagggcgggccagcgcgcgcaggccgagcgcaccctgcagcaggcctacgagatcgat
gcgggcaacccggtggtcggcttcaacctggccctggtgctctctcagcgagaagaatgg
tcgcgcgcgcagttctacattcgccgcgtcaacaacagcccctcggccagcgccgagacg
ctgtggctcggcatcaagatcgaacgaaagctcaacaaccgcgaagcagtggcgcagttg
ggaggccaactgcaacgacgcttcccccaatcgcgggaggcatcagcgtacgagcgcggg
aatttcaatgactga
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