Variovorax sp. PMC12: C4F17_03050
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Entry
C4F17_03050 CDS
T05380
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_03050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_03050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_03050
Enzymes [BR:
vam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
C4F17_03050
Amino acid related enzymes [BR:
vam01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C4F17_03050
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C4F17_03050
Prokaryotic type
C4F17_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AVQ80011
UniProt:
A0A2P1V4A2
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All DBs
Position
1:679027..680337
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AA seq
436 aa
AA seq
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MAEKLNAVKGMNDILPPESARWEWLEATVRDLMGRFAYRNVRTPILERTALFVRGIGEVT
DIVEKEMYSFEDRADKHGKFEHLTMRPENTAGLVRAVIEHNMLYEGPKRLWYTGPMFRRE
NVQRGRFRQFHQIGAEALGFAGPDVDAELILLANALWKAIGLTDVRLELNSLGQPAERAL
HRAELIAHFEKHADKLDEDGKRRLHSNPLRILDTKNPAMKDVVESAPKLIDFLGAESLAH
FEGLQAILKANDIAFTINPRLVRGLDYYNLSVFEFVTDRLGSQGTVCAGGRYDDLIAQIG
GKPAPAVGWAMGVERVLDLLKEQGAEVPAPVPDAYAIVPDAASMPIALRTLQQLREIGVR
VQMHAATADGLSSFKAQMKKADASGATYALIFGADELARGEVTLKALRDGSGAQTSRALA
EAPTWAATLQSPASNT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaattgaatgccgtcaaaggcatgaacgacatattgccgcccgaatcggcg
cgctgggagtggctcgaagccaccgtgcgcgacctgatggggcggtttgcgtaccgcaac
gtccgcacgccgatcctggagcgcaccgcgcttttcgtgcgcggcatcggcgaggtgacc
gacatcgtagagaaggagatgtactccttcgaggaccgcgccgacaagcatggcaagttc
gaacacctgaccatgcgccccgagaacacggcgggcctggtgcgcgcggtgatcgagcac
aacatgctgtacgaagggcccaagcgcctttggtacaccggccccatgttccgccgcgag
aacgtgcagcgcgggcgtttccgccagttccaccagatcggggccgaggcgctgggcttt
gccggtcccgatgtcgatgccgaactgatcctgctggcgaacgcgctctggaaggccatc
ggcctgaccgacgtgcgcctcgaactcaacagcctggggcagcctgccgagcgcgcgctg
caccgcgccgaactcatcgcgcacttcgagaagcatgccgacaagctcgacgaagacggc
aagcgccgcctgcacagcaatccgctgcgcattctcgacaccaagaatccggcaatgaag
gacgtggtcgagtcggcgccgaagctgatcgactttctcggggcagagtcgctcgcgcac
ttcgaggggctgcaggccatcctcaaggccaacgacatcgcgttcacgatcaatccgcgt
cttgtgcgcgggctggactactacaacctgtcggtcttcgagttcgtgaccgaccgcctg
ggttcgcaaggcacggtgtgtgccggtggacgctacgacgacctgattgcgcagatcggc
ggcaaacccgcgccggccgtgggctgggccatgggtgtcgagcgcgtgctcgacctgctc
aaggagcagggcgccgaggtgccggcaccggtgcccgacgcctacgccatcgtgccggat
gccgcctccatgcccatcgcgctgcgcacgctgcagcaattgcgcgagatcggcgtgcgc
gtgcagatgcatgcggccacggctgacggcctcagcagcttcaaggcgcagatgaagaag
gcggacgccagcggcgccacctacgccctgatcttcggtgccgatgaactcgcacgcggt
gaagtgactctcaaggcgctgcgcgacggaagcggcgcgcagacttcccgggcacttgct
gaagcccccacatgggccgccaccctacaatcgccggcttccaacacctga
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