KEGG   Variovorax sp. PMC12: C4F17_03065
Entry
C4F17_03065       CDS       T05380                                 
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vam03009]
    C4F17_03065
Ribosome biogenesis [BR:vam03009]
 Prokaryotic type
  GTPases
   C4F17_03065
SSDB
Motif
Pfam: MMR_HSR1 FeoB_N KH_dom-like GTP_EFTU AIG1 Dynamin_N RsgA_GTPase Roc AAA_22 ABC_tran SRPRB
Other DBs
NCBI-ProteinID: AVQ80014
LinkDB
Position
1:682246..683589
AA seq 447 aa
MKPVVALVGRPNVGKSTLFNRLTQTRDAIVADFAGLTRDRHYGNGRLGKHEFIVIDTGGF
EPDAGSGIYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHEIANELRRLGKPCVLAANK
AEGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALEPLNLPDPDDESDEDEVNKP
IKLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQRFELIDTAGLRR
KGRVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVIAINK
WDAVDSYQREQIQRQIETRLPFLKFAALHFISAIKRQGLGPVWQAIAQAHKSATRKMSTP
VLTRLLLEAVQFQAPKRGGMYRPKLRYAHQGGMNPPVIVIHGNSLEHVTDAYKRFLEGRF
RKEFDLVGTPLRIEFKSSHNPFADKDD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaagccggtcgtggccctggtcgggcgtcccaacgtcggcaagtcgacgctgttcaat
cgcctgacccagacgcgcgacgccatcgtcgccgatttcgccggcctcacgcgcgaccgc
cactacggcaacggtcgcctgggcaagcacgagttcatcgtgatcgacaccggcggcttc
gagcccgatgccggcagcggcatctacaaggaaatggccaagcagacgcggcaggccgtg
gctgaggccgacgtggtgatcttcgtcgtcgatgcccgcgaaggcctgtcggcgcaagac
catgagatcgccaatgagctgcgccgtctgggcaagccctgcgtgctcgcggccaacaag
gccgagggcatgcacgacggcaccaagctcgtggatttctacgagctgggcttcggcgac
gtgcacggggtttccgcagcgcacgggcaaggcatgcgcgacctggtcgagcttgcgctt
gagccgctgaacctgcccgatccggatgacgagtcggacgaggacgaagtcaacaagccg
atcaagctggcagtggcggggcggcccaacgtgggcaagtcgacgctgatcaacacctgg
cttggcgaagagcgactggtggcattcgacatgccaggcaccacgcgcgacgcgatttca
gtgcccttcgagcgcaacggccagcgcttcgaactgatcgacacggccggcttgcgccgc
aagggcagggtgttcgaggcgatcgagaaattctcggtggtcaagacgctgcaggccatc
gaatcggccaatgtggtgctgctgctgctcgacgccacgcagggcgtgaccgaccaggat
gcccacatcgcgggctacatcctcgaaagcggccgcgcggtggtgatcgccatcaacaag
tgggacgcggtcgacagctaccagcgcgagcagatccagcggcagatcgaaacccggttg
ccgttcctgaagttcgcggcattgcatttcatctcggccatcaagcgccagggccttggc
ccggtttggcaggcaattgcgcaggcccacaagtcggccacgcgcaagatgtcgacgccg
gtgctgacccggttgctgctggaggcggtgcagttccaggctcccaagcgcggcggcatg
tacaggcccaagctgcgttatgcgcaccagggtggcatgaatccgccggtgatcgtgatc
cacggcaattcgctcgaacatgtgaccgatgcttacaagcgcttcctcgagggacgcttc
cgcaaggaattcgacctggtgggtaccccgttgcggatcgaattcaagagctcccacaat
ccttttgccgacaaggacgactga

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