Variovorax sp. PMC12: C4F17_03460
Help
Entry
C4F17_03460 CDS
T05380
Name
(GenBank) MATE family efflux transporter
KO
K26939
MATE family, multidrug efflux pump
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_03460
Transporters [BR:
vam02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
C4F17_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
AVQ80083
LinkDB
All DBs
Position
1:complement(755982..757412)
Genome browser
AA seq
476 aa
AA seq
DB search
MALQRHPSPPQQPGRRPAALPEDQAPVSAQSGERGLIARHAGTVLVGQLAVMAFGVTDTI
IAGRYSEGALAALSVGAAIFISVYVSLMGVLQALLPVWAELHGGGRGSEVGRSVRQSLYL
AAIAIVVGMAALLAPAAVLRLTQVPPEMRGDVEMYLRVLAFALAPALLFRLFSTLNQSLG
KPQLVTWLQLGSLVVKLPLSIWFTFGGAGLPAMGLVGCGWATLCVNWAMLACAVWLLRSS
PFYRGYRLWERLEKPDWQQIRLFARMGVPGGLAVLVEVTSFTLMALFIARLGTAAAAAHQ
IAANLMAVAYMVPLSLSIATSARVSFWLGAGDVARARHACRLGFEQTVLCALLFSTALVT
LRHQLANVYSDNPAVVGLAAALMVAVAAYHLADAVQTLCVFLLRCYRVTLAPLVIYCTML
WGLGLGGSYMLAYHGLGPWGAMQSPLAFWIMSAGALAVTALFFITLLRWTMNKRSA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcagcggcacccttcgccgccccagcagcccggccgacgacctgctgctcta
ccagaagatcaagccccagtgagcgcacaaagcggcgaaaggggcctgatcgcgcggcat
gccggcacggtgctggtcgggcagctggccgtgatggccttcggcgtgaccgacaccatc
atcgccggccgctactcagagggcgcgctggccgcgctgtcggtgggcgcggcgatcttc
atcagcgtgtatgtgtcgctgatgggcgtgctgcaggcgctgctgcctgtgtgggccgaa
ctgcacggcggcggccgcggcagcgaagtaggccgctcggtccggcaatcgctgtatctc
gccgccattgccatcgtggtcggcatggcggcgctgctcgcacctgccgccgtgctgcgg
ctcacacaggtaccgcccgaaatgcgcggcgacgtggagatgtaccttcgcgtgctggcc
ttcgccctggctcccgccctgctctttcgcctgttcagcacgttgaaccagagcctgggc
aagccgcaactcgtgacctggctgcagctcggctcgctggtggtgaagctgccgctctcg
atctggttcaccttcggcggcgcgggcctgccggcgatgggactggtgggctgcggctgg
gccacgctgtgcgtgaactgggccatgctcgcctgcgcggtctggctgttgcgcagcagc
cctttctatcgcggctacaggctatgggagcgcctcgagaagcccgactggcaacagatt
cgcctgttcgcacggatgggcgtgccgggcgggctggccgtactggtcgaagtgacctcg
ttcacgctgatggcactgttcatcgcgcgccttggcacggctgccgccgcggcgcaccag
atcgccgcgaacctgatggcggtggcatacatggtgccgctgtcgctctcgatcgcgacc
agcgcgcgcgtgagtttctggctgggcgcgggcgatgtcgccagggcgcgccatgcatgc
aggctgggtttcgagcagaccgtgttgtgcgccctgcttttctccaccgcgctggtcacg
ctgcgccatcagttggccaacgtgtactcggacaaccccgccgtggtcgggctggccgcg
gcgctgatggtggcggtagctgcataccacctggccgacgccgttcagacgctgtgcgtg
ttcctgctgcggtgctaccgggtgacgctcgcgccgctggtcatctactgcacgatgctc
tggggcctggggctcggtggcagctacatgctggcgtatcacggcctgggtccgtgggga
gccatgcaatcgccgctggcgttctggatcatgagcgcgggcgcgctggccgtgacggca
ctgttcttcatcaccctgctgcgctggacgatgaacaagcgctcggcctga
DBGET
integrated database retrieval system
