Variovorax sp. PMC12: C4F17_03530
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Entry
C4F17_03530 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15553
sulfonate transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam00920
Sulfur metabolism
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
C4F17_03530
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_03530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_03530
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
C4F17_03530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMT1
NMT1_2
Phosphonate-bd
NMT1_3
OpuAC
DUF8755
Motif
Other DBs
NCBI-ProteinID:
AVQ80096
LinkDB
All DBs
Position
1:773477..774514
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AA seq
345 aa
AA seq
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MLHRRALISASAIAAATIALPRVFAQQAKLEKTKVSIAVGGKAAFYYLPLTISEQLGYFK
AEGLDVEISDFAGGARALQAVVGGSADVCSGAYEHTINLQAKNQFFQAFVLQGRAPQIAV
GVSTRNMAGYTGIQDLKGKKIGVSAPGSSTNMVANLVLSRGGLKASDVSYIGVGVAAGAL
TALRSGQIDAISNTDPVMTMLEQKGDVKIISDTRTLKGTQQVFGGTMPAACLYASADFIQ
KNPNTCQALANAIVHGLKWLQTAGPGDIIKTVPETYLLGDRALYLASFDKVRESIATDGL
VPADGPKTALTAIASFDTTVKADKIDLAKTYTNDFARRAKDRFKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgctccatcgccgcgccctcatttccgcctccgccattgccgccgcaaccatcgcgttg
ccgcgtgtctttgcgcaacaggcgaagctggagaagaccaaggtctccatcgcggtgggt
ggcaaggcggcgttctactacctgccgctgaccatctccgagcagctcggctacttcaag
gccgaagggctggacgtggaaatctccgacttcgccggcggcgcgcgtgcgctgcaggcc
gtggtcggcggctcggccgacgtgtgctccggcgcgtacgaacacaccatcaacctccag
gccaagaaccagttcttccaggccttcgtgctgcagggccgcgcgccgcagatcgcggtg
ggcgtgtcgaccaggaacatggccggctacaccggaatccaggatctcaaggggaagaag
atcggcgtctcggcaccgggctcgtcgaccaacatggtggccaacctcgtgctgtcgcgc
ggcgggctcaaggccagcgacgtgagctacatcggcgtgggcgtggcggccggcgcgctc
accgcgctgcgctcgggccagatcgacgccatcagcaacaccgacccggtgatgacgatg
ctcgagcagaagggcgacgtgaagatcatcagcgacacgcgcacgctcaagggcacgcag
caggtgttcggcggcacgatgccggcggcctgcctgtacgcgtcggccgatttcatccag
aagaatcccaacacctgccaggcgctggcgaacgccatcgtgcacgggctcaagtggctg
cagacggcagggccgggcgacatcatcaagacggtgccggagacctacctgctcggcgac
cgcgcgctgtacctcgcgtccttcgacaaggtgcgcgagtcgatcgcgaccgacggcctc
gtgccggccgacggccccaagaccgcgctcaccgccatcgccagcttcgacaccacggtg
aaggccgacaagatcgacctcgccaagacctacaccaacgattttgcaaggcgcgcgaaa
gacaggttcaaagcctga
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