Variovorax sp. PMC12: C4F17_03835
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Entry
C4F17_03835 CDS
T05380
Name
(GenBank) IclR family transcriptional regulator
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_03835
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
IclR family
C4F17_03835
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GFIT
Motif
Pfam:
IclR
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVQ80154
UniProt:
A0A2P1V4Q1
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Position
1:834994..835764
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AA seq
256 aa
AA seq
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MTIARADFIEGIAKGMAVLESFDTERQRLNATLAAERAGLTRAAARRHLLTLAHLGYLET
DGSYFWMAPKVLRFSGSYLASSRLPRALQPTLNRLAAQTGESFSAVVLDGEEVVIVARSG
SYGTPTRVLAYGLHLGARLPAHATSTGRVLLAAMAPTVFTQWLKGRHLARLTPHTVTQAR
GLRQLVARARKDDYCFASEEHELGVQALAVPLRDMQGHTVAALNMVLSGTRYQEEALQRD
MLPLLFEAAREVRSLL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgccagagccgacttcatcgagggcattgccaagggaatggcggtgctcgag
agcttcgacaccgagcgccagcggctcaacgccacgctggccgcggagcgcgccggcctc
acccgcgccgcggcccgccgccacctgctgacgctggcgcacctgggctacctggaaacc
gacggcagctatttctggatggcgccgaaggtgctgcgcttctcgggcagctacctcgcg
tcgtcgcgcctgccacgtgccctgcaacccacgctgaaccggctggcagcacagacgggc
gagtctttctcggcggtggtgctcgacggcgaggaggtggtcatcgttgcgcgcagcggc
agctacggcacgccgacgcgcgtgctggcctacggcctgcacctgggcgcacggctgccg
gcccatgcgacctcgaccggccgcgtgctgctggccgcgatggcgccgaccgtgttcacg
caatggctcaagggccgccacctggcgcggctcacgccccacacagtgacccaggcgcgt
ggcctgcgccagctggttgcccgcgcccgcaaggacgactattgttttgccagcgaggaa
catgaactgggcgtgcaggcgctggcggtgccgttgcgggacatgcagggccacacggtg
gcggcgctgaacatggtgctgtcgggcacgcgctaccaggaagaggccctgcagcgcgac
atgctcccgctattgttcgaagcagcgcgggaagtgcgttcgctgctgtga
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