Variovorax sp. PMC12: C4F17_03890
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Entry
C4F17_03890 CDS
T05380
Name
(GenBank) AraC family transcriptional regulator
KO
K13652
AraC family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_03890
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C4F17_03890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
DUF3138
Motif
Other DBs
NCBI-ProteinID:
AVQ80163
LinkDB
All DBs
Position
1:complement(845685..846548)
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AA seq
287 aa
AA seq
DB search
MESRRTEQDYRARVARAVAAIVADPMADHRLEDLARLAHFSPFHFHRVYASVAGETVAAT
VRRVRLALATQLLEAGGQSITQVALAVGYESPQAFTRAFGQFTGQSPREFQRQMARAVLD
VDAIPQAGNDGGAPPAVRIVERSAQRLHALRHQGSFATIPHTHRRLRLHAGTRVLSEHWG
ASFSAPEDTSGFRYYAAFASPDPWPEDGSGVELLDIPGGCYAVHRLAGPYARINAAVQSL
YARWLPGSGYEPDDRPTLEHYLNSPRTVRQAELRTDLLIPIRRADSS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccgtcgaacagagcaggactaccgggcccgcgtggcacgcgcggtcgcggcc
atcgttgccgacccgatggccgatcaccggctcgaagacctcgcgcggctcgcgcacttc
tcaccctttcatttccatcgcgtctacgccagcgtggctggcgagaccgtggccgccacg
gtccgccgtgtgcggctcgcgctcgcgacgcaactgctcgaagccggcggccagagcatc
acgcaggttgcgctggcggtgggctacgagagcccgcaggccttcacgcgcgccttcggg
cagttcaccggccagtcgccgcgcgagttccagcggcagatggcgcgcgcggtgctcgat
gtcgatgcgataccgcaggccggcaacgacggcggcgcgccacccgccgtgcggatcgtc
gagcgctccgcgcagcggctgcatgcgctgcggcaccagggctcgttcgcgaccattccc
cacacccatcggcggctgcgcctccatgcgggaacgcgggtgctgtcggagcactggggc
gcgtccttcagcgcgcccgaggacaccagcggcttccggtactacgcagcgttcgcttcg
cctgacccgtggccggaggatggctcgggcgtcgagttgctcgacatcccgggcggctgc
tatgccgtgcatcgcctggccggcccctatgcgcgcatcaatgccgccgtgcaatcgctc
tatgcgcgatggctgccgggcagcggctacgaacccgacgaccggcccacgctggagcac
tacctgaattcgccgcgaacggtgcggcaagccgagttgcgcaccgatctgctgattccg
attcgccgcgccgactcgtcgtga
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integrated database retrieval system
