Variovorax sp. PMC12: C4F17_04365
Help
Entry
C4F17_04365 CDS
T05380
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_04365 (smc)
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
C4F17_04365 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
ABC_tran
AAA_29
YbbR
Crescentin
Motif
Other DBs
NCBI-ProteinID:
AVQ80246
UniProt:
A0A2P1V4Y6
LinkDB
All DBs
Position
1:937034..940549
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFLLPGQLVGVVGPNGCGKSNIMDAVRWVLGESRASELRGES
MQDVIFNGTTTRKQASRSSVELVFDNADHRAGGQWNQFGEIAVRRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
ENRLGDTRENLTRVEDILRELNANLEKLEKQAEVAARYNMLQGDATKKQHQLWFLKRSES
NADQARIKADSEKAINDLESRTADLRRIESELETVRQAHYGAGDLVNQAQGKLYEASAEV
GRLEGEIRFVVEGRQRVEQRLVQLREQMGQWGRRREEAEAEIETLAGAGVDAEEQAILLA
AQLEEHDARMPELEEAVQRAQDQANAQRTTVSQVQQQIQVLAADQRNIEEQSRQLTQRSE
RLRADQNALAAPDEARLLDMQEQHAAAQEAASEADARLQELQESVPQLDDDRRARQQAVN
TEGARHAEFSARLDALRALQEKVKTDGKLAPWLAKHGLDGLQGLWSRIHIEQGWESALEA
ALRERLGALEVSRLDMVRAFGNDAPPAKLAFYSPPAAGVPEAAAALPRLSSLLRLNDAGQ
QALLTDWLHGCYTAESFEEALAQRATLQAGEVIYVKSGHAVSSHSVNFYAPDSEQAGLLA
RQQEMENLERQLRAQTLINEEARTALVRAEAAYADAAQRLVTARREAAETQSRAHELQVE
TLRMTQLAEQTRARSQQLAADLGEVDAQLEELQERRIAAEGRFEELDMQLADSQERHAEL
DERVIEAGRALNASREQHRSLERQAQEATFSQRTLEARRAELNRSIETAAQQVVSLTDED
ERARAELSRLSDAAAQAGLQDALSLKLEREAALGSARSQYDDLTLKLRASDERRLQLERE
LEPLRQRITEFQLKEQAARLGVEQYQQLLDDAGADLEAIEQSIETDKVKLTGLQSEIDRL
NREVVALGAVNLAALDELAVASERKTFLDAQSTDLNEAIGTLEDAIRKIDAETRDLLGGT
FKIVNEHFSRMFPELFGGGNAKLMMTGDEILDSGVQVMAQPPGKKNQTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVSAMSRETQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMEAAASMVAAG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcttaattccatcaagctctcgggcttcaagtcgttcgccgaacccaccaacttc
ctgctgccgggccaactggtcggcgtggtcgggcccaacgggtgcggcaagtcgaacatc
atggatgcggtgcgctgggtgctcggcgagtcgcgtgcgtcggagttgcgcggcgagtcg
atgcaggacgtgatcttcaacggcacgaccacccgcaagcaggccagccgttcgagcgtg
gagctggtgttcgacaacgccgaccaccgcgccggcggccaatggaaccagttcggcgaa
atcgcggtgcgccgcgtgctcacgcgcgacggcaccagcagctactacatcaacaaccag
ccggtgcgacgccgcgacgtgcaggacgtgttcctgggcaccggcctgggcccgcgcgcc
tacgccatcatcggccagggcacgatcagccggatcatcgaatccaagcccgaggaactg
cgcctgttcctcgaagaggccgccggcgtctccaagtacaaggagcgccgccgcgagacc
gagaaccgcctgggcgacacgcgcgaaaacctcacgcgcgtggaagacatcctgcgcgaa
ctcaacgccaacctcgagaagctcgagaagcaggccgaggtggccgcgcgctacaacatg
ctgcagggcgacgccacgaagaagcagcaccagctgtggttcctcaagcgcagcgaaagc
aacgccgaccaggccaggatcaaggccgattccgagaaggcgatcaacgacctcgagtcg
cgcaccgccgacctgcgccgcatcgagtccgagctggagaccgtgcgccaggcgcactac
ggcgccggcgacctggtcaaccaggcccagggcaagctctacgaggccagcgccgaagtc
ggccggctcgaaggcgagatccgcttcgtggtcgaaggacgccagcgcgtcgagcagcgc
ctggtgcagctgcgcgagcagatgggccagtggggccgccgccgcgaagaggccgaggcc
gagatcgaaacgctggccggcgcgggtgtcgatgcggaggagcaggccatcctgctcgcc
gcccagctcgaagaacacgacgcgcgcatgcccgagctcgaagaagccgtgcagcgcgcg
caagaccaggccaacgcccagcgcacgaccgtctctcaggtgcagcagcagatccaggtg
ctggccgccgaccagcgcaacatcgaagagcagagccgccagctcacgcagcgcagcgaa
cgccttcgcgcagaccagaacgcgctggccgcgcccgacgaggcccggctgctcgacatg
caggagcagcatgccgccgcgcaggaagccgcgagcgaggccgacgcgcgcctgcaggaa
ctgcaggaatcggtgccgcagctcgacgacgaccgccgtgccaggcagcaggcggtcaat
acggagggcgcccgccatgccgagttctcggcccgcctcgatgcgctgcgcgcgctgcag
gagaaggtcaagaccgacggcaagctcgcgccctggctcgccaagcacggcctcgacggg
ctgcaaggcctgtggagccgcatccacatcgaacagggctgggaaagcgcgctcgaagcc
gcgctgcgcgagcgcctgggtgcgctcgaagtcagccgcctggacatggtgcgcgctttc
ggcaacgacgcgccgcccgccaagctcgctttctacagcccgccggccgcgggcgtgccg
gaagccgctgccgcgctgcctcgcctttcgagcctgctgcgcctgaacgacgccggccag
caggccctgctgaccgactggctgcacggctgctacaccgccgagagcttcgaggaagcg
ctggcccagcgcgcgacgctgcaggccggcgaagtgatctacgtgaagagcggccacgcc
gtgtcttcgcacagcgtcaatttctacgcgcccgattccgagcaggccggcctgctggcc
cgccagcaggaaatggaaaacctggagcgccagctgcgtgcccagacgctcatcaacgaa
gaagcgcgcaccgcgctggtccgcgccgaagcggcctatgccgacgccgcgcagcgcctc
gtgaccgcgcggcgcgaagctgccgagacccagtcgcgcgcgcacgaactgcaggtcgag
accctgcgcatgacgcagctggccgagcagacccgcgcccgcagccagcagctggccgcc
gacctcggcgaagtcgatgcgcagctcgaggaactacaggaacgccgcatcgccgccgaa
gggcgcttcgaagagctcgacatgcagctggccgacagccaggagcgccacgccgagctg
gacgaacgcgtgatcgaggccggccgtgcgctgaacgccagccgcgaacagcaccgcagc
ctcgagcgacaggcgcaggaggccaccttctcgcaacgcacgctcgaggcacgccgggcc
gaactcaaccgctccatcgaaaccgcggcgcagcaggtcgtgtcgttgaccgacgaggac
gagcgcgctcgcgccgaactgagccgcctgtccgacgccgccgcgcaggccggtctgcag
gacgcgctgtcgctcaagctcgaacgcgaagcggccctgggctcggcgcgcagccagtac
gacgacctcacgctcaagctgcgcgccagcgacgagcgccgcctgcagctcgagcgagaa
ctcgagccgctgcgccagcgcatcaccgaattccagctcaaggaacaggccgcgcgcctg
ggcgtcgagcaataccagcaactgctggacgatgccggcgccgacctcgaagccatcgag
cagtcgatcgagaccgacaaggtcaagctcaccggcctgcagagcgaaatcgaccgcctc
aaccgcgaagtggtcgcgctcggcgccgtgaacctggccgcgctcgacgaactggctgtc
gccagcgagcgcaagactttcctcgacgcccagtcgaccgacctgaacgaggccatcggc
acgctcgaagacgccatccgcaagatcgacgccgaaacgcgcgacctgctcggcggcact
ttcaagatcgtcaacgagcacttcagccgcatgttccccgagctgttcggcggcggcaac
gccaagctcatgatgaccggcgacgagatcctcgactcgggcgtgcaggtgatggcgcag
cctcccggcaagaagaaccagaccatccacctgctctcgggcggcgagaaggcgctcacg
gccatcgcgctggtgttcgccatcttccagctgaacccggcgcctttctgcctgctggac
gaagtggacgcgccgctggacgacgccaacaccgagcgctatgcaaaactcgtctccgcc
atgagccgtgaaacccagttcctgttcatcagccacaacaagatcgccatggaaatggcc
gagcagctgatcggcgtgacgatgcaggagcagggcgtgtcgcgcatcgtggcggtcgac
atggaggccgccgcctccatggtggcggcaggctga
DBGET
integrated database retrieval system
