Variovorax sp. PMC12: C4F17_04440
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Entry
C4F17_04440 CDS
T05380
Name
(GenBank) cellulose synthase
KO
K20543
cellulose synthase operon protein C
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_04440
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCSC_C
TPR_19
TPR_14
TPR_16
TPR_17
TPR_8
TPR_2
TPR_7
TPR_CcmH_CycH
TPR_12
ARM_TT21_5th
ANAPC3
TPR-S
TPR_Slam
ARM_TT21
ChAPs
TPR_9
DUF7017
Motif
Other DBs
NCBI-ProteinID:
AVQ80260
LinkDB
All DBs
Position
1:complement(954943..959271)
Genome browser
AA seq
1442 aa
AA seq
DB search
MPSQSTGVKPKRPPSFRTQQWLACIGMLAALGTGGQAFAQADASAALIEQGNYWQAQGRA
DLAEESWKKLLSVNPQSADAMYGMAQVELSRNNAEQVRTWTNRLRAAHPNDPRVARLQQQ
AQQPGQQGGTLQRARAAARAGRSAEAVELYRSLFDNRPPPEAVALEYYQALASTPQGIEE
GRKGLEQLVKDHPENANYRLALAQQKTYSEPTRRAGIRELVELAKQPAVATAARAAWRQA
LIWLDARAPDIPLYQDYLSNNQADAAVSARLETLTTARTAAANAPDVPVGEGFKALERGD
PATAEQRFQQALRTKADDTEALGGLGLVRMRQERFAEAQELLERAVRGGATKWNSALQSA
NYWVLVGQARAAQGKNDLRGAQSLYERAVRIDPREPVGQNALADLRAAAGDFAQAEQGYK
RVLESRPQNTQALRGLISVYGQTGRPDEALALSRRLTPEQATQMGGLRDIQVEQARNRAR
QQADAGDAAGAQRTLEDAMLAAPDSPWVRLDLANIYRKQGMVSEARGVMEGLLMSQPDMP
DALYASALLASETGDSAAGIQYLERIPAGSRTRDMATLQRRLWAQSQAARAQALARQGQV
DAARGVLAQAESALSADMPAELWGQLAGAYAEIGDAPRALAMSRQLLARSPTPSIGDRLL
YASVLLKTKQDIELSAVLRQLAGVNMTASQRNDFDSLRIAFALRQTDALREAGNLEAAYN
AMAPVLAERPNDPQAMAALARLYSAARDEGQALALYQRILQRNPTDLDTLLAAAASASAQ
REHGEAENYVMAALKQAPDQSRVLAAAGRVYRNAGESRKAEQYLRAAVEAERQVASTGFA
GAGGAPSQMPPANPFAGMTGGAPSAAVPAGYPAAGGNPFAQARSQPVSYPVAANAAYPAY
PAAGYPAGTYPAAYPAAPMAAAPGALPWGAAPAATSNTKGRAANTRTARNSKAANNTPQA
SAYAAQPGGQPVYIPQAQPAGYPQQQAGYPAPGYPPAAYPSANAAYAQANTPLPRSEPSW
NAPLRAAPAPASSLQSELQDLEAQRAVSLTAGTVYRSRAGEAGLSQLSDFQLPIQARFPV
GEGKIVVGVTPTVVDAGTPSSAYSTASRFGGGPTAFYNSIASQTTPGQQNAAGVGLNVGY
EGKNFEGGIGTTPLGFPTTNVVGNATFKGSFGDSWTYKADISRRAVTDSVLSFAGAKDGR
TGERWGGVVATGVRGDIGYDDGTYGIYSYLAAHSLTGKNVASNSRVETGGGAYLHLLDSP
SSKLTLGMNIGLMGYQKNLSYYTFGQGGYFSPQSFVSVAFPVDWTGRANRFSWRVNASLG
VQSFTQKSSPYFPTDPSRNTDAQRVADAALALGLSSSAYNGIYPSSSKTGLAYNFGAVLE
YQLAPKMFLGGALGFNNAQNYRQFTGSMYLRYVFGGSSNLGVPSLGGGTSLSPMVSPYTP
LL
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccaatcgaccggcgtgaagccgaagcgtcccccctccttccgcacccagcaa
tggctggcctgcatcggcatgctcgcggcgctgggcaccggcggccaggccttcgcgcag
gccgacgccagcgccgccctcatcgagcaaggcaactactggcaggcccagggccgcgcc
gacctggccgaagagagctggaagaagctgctgagcgtcaacccgcaatccgccgacgcg
atgtacggcatggcgcaggtcgagctgtcgcgcaacaacgccgagcaggtgcgcacctgg
accaaccgcctgcgcgccgcgcatcccaacgatccccgcgtcgcgcgcctgcagcagcag
gcccagcagcccggccagcagggcggcaccctgcagcgcgcccgcgccgccgcgcgtgcc
ggacgctccgccgaggcggtggagctgtaccgcagcctgttcgacaaccggccgccaccg
gaggccgtggccctggagtactaccaggcgctggccagcaccccgcaaggcatcgaagaa
ggccgcaagggcctcgagcagctggtgaaggaccacccggaaaacgccaactaccggctc
gcgctcgcgcagcagaagacctacagcgaaccgacgcgccgcgcgggcatccgcgaactg
gtcgagctggccaagcagcccgccgtggccaccgccgcgcgcgccgcctggcggcaggcg
ctgatctggctcgacgcgcgcgcgcccgacatcccgctctaccaggactacctgagcaac
aaccaggccgatgccgccgtgtccgcgcggcttgaaacgctcaccaccgccaggaccgcc
gcggcgaatgcgcccgacgtgccggtgggcgaaggcttcaaggcgctggaacgcggcgac
ccggccacggccgagcagcgcttccagcaggcgcttcgcaccaaggccgacgacaccgag
gcgctcggcggcctgggcctggtgcggatgcgccaggagcgctttgccgaagcgcaggag
ctgctggagcgcgccgtgcgcggcggcgccaccaagtggaactctgcgctgcaaagcgcc
aactactgggtgctggtcgggcaggcgcgcgccgcccagggcaagaacgacctgcgcggt
gcgcagtcgctgtatgaacgcgccgtgcgcatcgacccgcgcgaacccgtgggccagaac
gcattggccgacctgcgcgccgccgccggcgacttcgcgcaggccgagcagggctacaag
cgcgtgctcgagagcaggccgcagaacacgcaggcgctgcgcgggctgatctcggtgtac
gggcagaccggccgccccgacgaggcgctggcgctgtcgcgccgcctcacgcccgagcag
gccacgcagatgggcggcctgcgcgacatccaggtcgagcaggcgcgcaaccgcgcccgc
cagcaggcggatgccggcgacgcggccggtgcccagcgcacgctcgaagacgcgatgctc
gcggcgcccgacagcccctgggtgcggctcgacctcgcgaacatctaccgcaagcagggc
atggtctccgaagcgcgcggcgtgatggaagggctgctgatgtcgcagcccgacatgccc
gacgcgctgtacgccagcgccctgctcgcctccgaaaccggcgattcggccgccggcatc
cagtacctcgaacgcatccccgccggctcgcgcacccgcgacatggcgacgctgcaacgc
cgcctgtgggcgcagtcgcaggccgcccgtgcgcaggcactcgcgcggcaaggccaggtc
gacgccgcgcgcggcgtgctcgcccaggccgaatcggcgctgagcgcggacatgccggcc
gaactgtggggccagctcgcaggcgcatacgccgagatcggcgacgcgccgcgcgcactg
gccatgagccgccagctgctcgcacgctcgcccacgccgagcatcggcgaccggttgctg
tatgcgtcggtgctgctcaagacgaagcaggacatcgaactgtccgccgtgctgcgccag
cttgccggcgtcaacatgacggccagccagcgcaacgacttcgacagcctgcgcatcgcc
tttgcgctgcgccagaccgacgcgctgcgcgaagccggcaacctcgaggccgcctacaac
gcgatggccccggtgctggccgagcgcccgaacgacccgcaggcgatggccgcgctggcc
cgcctgtattcggcggcgcgcgacgaaggccaggcgctggcgctgtaccagcgcatcctg
cagcgcaacccgaccgacctcgacacgctgctggccgccgccgccagtgccagcgcgcag
cgcgagcacggcgaggccgagaactacgtgatggccgcgctgaagcaggcacccgaccag
tcgcgcgtgctggccgccgccggtcgcgtctaccgcaacgcaggcgaaagccgcaaggcc
gagcagtacctgcgcgccgcggtcgaagccgaacggcaggtcgcctcgactggcttcgcg
ggagcgggcggcgcgccttcgcagatgccgcccgccaacccgttcgctggcatgaccggc
ggcgcgccgagcgcggccgtgccggccggctatccggccgccggtggcaatcccttcgcg
caggcacgctcgcagcccgtctcctacccggtcgcggcgaatgcggcttaccccgcctac
cctgcggcaggctaccccgccggtacctatcccgccgcctatccggcagccccgatggcg
gcagcaccgggtgcgctgccctggggcgccgcgcccgccgcaacatcgaacaccaagggc
cgcgccgccaacacgcgcaccgcgcgcaacagcaaggccgccaacaacacgccgcaagct
tcggcgtatgcagcgcagccgggcgggcagccggtctacattccccaggcgcagcctgcc
ggctatccgcagcagcaggccggctatcccgcgccgggctatccgccggccgcctatccg
tcggccaacgcggcctatgcgcaagccaacacgccgctgccgcgcagcgagccgagctgg
aacgcgccgctgcgcgcggcgcccgcaccggcaagctcgctgcagtcggagctgcaggac
ctggaagcgcagcgcgcggtgagcctcaccgcgggcacggtgtaccgcagccgcgcgggc
gaagcgggcctgagccagctctccgatttccagctgccgatccaggcgcgcttcccggtg
ggcgaaggcaagatcgtcgtcggcgtgacgcccacggtggtcgacgccggcacgccctct
tccgcctactccaccgccagccgcttcggcggcggccccacggccttctacaactcgatc
gccagccagaccacgccgggccagcagaacgccgcgggcgtcggcctgaacgtgggctac
gagggcaagaacttcgagggcggcatcggcaccacgccgctgggcttcccgaccaccaac
gtggtcggcaacgcgaccttcaagggcagcttcggcgactcctggacctacaaggccgac
atctcccgccgcgcggtgaccgacagcgtgctgtccttcgccggcgcgaaggacgggcgc
accggcgaacgctggggcggcgttgttgccaccggcgtgcgcggcgacatcggctacgac
gacggcacctacggcatctacagctacctggcggcgcacagcctcaccggcaagaacgtg
gcgagcaactcgcgcgtggaaaccggcggcggcgcatacctgcacctgctggacagcccc
agctccaagctcacgctgggcatgaacatcgggctgatgggctaccagaagaacctgagc
tactacaccttcgggcaaggcggctacttcagcccgcagagcttcgtgagcgtggccttc
ccggtcgactggaccggccgcgcgaaccggttctcgtggcgcgtgaacgcctcgctgggc
gtgcagtcgttcacccagaaatcgtcgccctacttccccaccgacccctcgcgcaacacc
gatgcgcagcgcgtggcggacgcggccctggcgctggggctgagcagctcggcatacaac
ggcatctatccgagcagttcgaagaccggcctggcctacaacttcggcgcggtgctggag
taccagctggcgccgaagatgttcctgggcggcgcgctgggcttcaacaacgcgcagaac
taccgccagttcaccggcagcatgtacctgcgctatgtgttcggcggctccagcaacctg
ggcgtgccgagcctcggcggcggaacctcgctgagcccgatggtctcgccctacacgccg
ctgctgtaa
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