Variovorax sp. PMC12: C4F17_04545
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Entry
C4F17_04545 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_04545
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_04545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_04545
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_04545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Glyco_tran_WecG
DUF4860
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
AVQ80280
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All DBs
Position
1:988165..989397
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AA seq
410 aa
AA seq
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MNFALKIAAAAVIAATATGALAQKGETVKIAWLDPLSGLMAAVGTNQLKTFQFFAEEFNK
KNAAGVKFEIIGIDNKLSPQETTSALRSALDQGARYIVQGNGSGPALAIIDALEKNNARN
PGKEALYLNYAAVDPDLTNSKCSYWQYRFDADTSMKMEALTTYMKDQPDIKKVYIIGQNY
AHGQQVSKFAKEDLKHKRPDIQIVGDDLHPLAQVRDFAPYIAKIKASGADTVITGNWGSD
LALLIKSANDSGLNVKFYTYYAVTTGTPTAMGAASDGKVYQVGYAHYNMGGDMQKYAEDF
KKKFNDDLYTTDIYTVFQALTEAFVKTKSTDPVKVAAAMEGMKFKSFNGDVELRKADHQL
QQGLYIARWEKASAKYPYSPENTGYTLAPVKYYDAYVASTPTSCQMKRPS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcgctctgaaaatcgctgccgcagccgtcattgcggccaccgccaccggtgcc
ctcgcccagaagggtgaaaccgtcaagatcgcatggctcgacccgctgtcgggcctcatg
gccgcggtcgggacgaatcagctcaagaccttccagttcttcgccgaagagttcaacaag
aagaacgccgccggcgtgaagttcgagatcatcggcatcgacaacaagctcagcccgcag
gagaccaccagcgcactgcgctcggccctcgaccagggcgcgcgctacatcgtgcagggc
aacggctccggccctgcgctggccatcatcgatgcgctcgagaagaacaatgcgcgcaac
cccggcaaggaagcgctgtacctgaactatgcggccgtcgaccccgacctgaccaacagc
aagtgcagctactggcagtaccgcttcgacgccgacacgtcgatgaagatggaagcgctg
accacctacatgaaggaccagccggacatcaagaaggtctacatcatcggccagaactat
gcgcacggccagcaggtttccaagttcgccaaggaagacctgaagcacaagcgcccagac
atccagatcgtcggcgacgacctgcatccgctcgcgcaggtgcgcgacttcgcgccgtac
atcgcgaaaatcaaggcttccggcgccgataccgtcatcaccggcaactggggctccgac
ctcgcgctgctcatcaagtccgccaacgactcgggcctgaacgtcaagttctatacctac
tacgccgtgaccaccggcacgccgaccgccatgggcgcggcgtccgacggcaaggtctac
caggtcggctatgcccactacaacatgggcggcgacatgcagaagtacgccgaagacttc
aagaagaagttcaacgacgacctctacaccaccgacatctacaccgtgttccaggccctg
accgaagccttcgtgaagaccaagtcgaccgaccccgtcaaggtggccgccgccatggaa
ggcatgaagttcaagagcttcaacggcgacgtcgaactgcgcaaggccgaccaccagctg
cagcagggcctgtacatcgcccgctgggaaaaggccagcgccaagtacccgtacagcccg
gagaacaccggctacacgctggcacccgtgaagtactacgacgcctacgtggccagcacg
cccaccagctgccagatgaagcgcccctcctga
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