Variovorax sp. PMC12: C4F17_04580
Help
Entry
C4F17_04580 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K13049
carboxypeptidase PM20D1 [EC:3.4.17.-]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vam01002
]
C4F17_04580
Peptidases and inhibitors [BR:
vam01002
]
Metallo peptidases
Family M20
C4F17_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF3126
Motif
Other DBs
NCBI-ProteinID:
AVQ80286
LinkDB
All DBs
Position
1:995599..997074
Genome browser
AA seq
491 aa
AA seq
DB search
MLKRIFLGLLLAIVLLVAAVAVKTWTTPSQQLAVAPAPKLDIDLQAAAKRLSTAITFRTV
SGMDDPAANAAEFDKLHAYLEQQFPKVHATLKKEVMGNKALLYTWAGTDPQARPIALMAH
QDMVPIAPGTEKAWTVDPFAGEIKDGYVWGRGTLDNKSNLFAQMEAIELLIGAGFKPRQT
VYLVMGDDEEVSGLRGALPIAELLKSRNVRLDWVLDEGLLVLDGVLPGLSRPAALIGLAE
KGYGTFFLSLDTAPGHSSMPPQHSAIGSMSAALARLEANPMPGGIKGIAGQMFGTLAPEM
GGVNRVMLSNLWLTEPVVRGILEKSPSSNAMLRTTTALTIVRAGNKDNVLPGRAEAAVNF
RILPGDTLASVEAHLRKQLANDDIKIKQYPGNAEPSPVSPTDSTGYRAIQQAVRQSFPDA
VVAPGLMTAATDSRHFSLVSDAVFRFSPFRLKGEDLARIHGNNERLAISNYGEMIGFYHQ
LLSNTNAAPAQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacgcatcttccttgggctgctgctggcaatcgtcttgctggtggccgccgtg
gcggtcaagacctggaccacgccgtcgcagcagctggcggtggcgcccgcgcccaagctg
gacatcgatctgcaggcggcggccaagcggctgtccacggcgatcacgttccgcacggtg
tcgggcatggacgacccggccgccaacgcggccgagttcgacaagctgcatgcctatctg
gagcagcagtttcccaaggtgcacgccacgctcaagaaagaggtgatgggcaacaaggcg
ctgctctacacctgggccggcaccgatccgcaggccaggcccatcgcgctgatggcgcac
caggacatggtgcccatcgcgccgggcaccgagaaggcctggacggtcgaccccttcgcc
ggcgagatcaaggacggctacgtctggggccgcggcacgctcgacaacaagagcaatctc
ttcgcgcagatggaagccatcgagctgctcatcggcgccggcttcaagccgaggcagacc
gtctacctcgtgatgggcgacgacgaagaggtgagcggcctgcgcggcgcgctgcccatc
gccgagctgctcaagtcgcgcaacgtgcggctggactgggtgctcgacgagggcctgctg
gtgctcgacggcgtgctgccgggcctgagcaggccggcggcgctcatcggcctggcggag
aagggctacggcaccttcttcctgtcgctcgacacggcgcccggccattcgtcgatgccg
ccgcagcacagcgccatcggcagcatgagcgcggcgctcgcacggctcgaagccaacccg
atgcccggcggcatcaagggcattgccggacagatgttcggcacgctcgcacccgagatg
ggcggcgtgaaccgcgtgatgctctcgaacctgtggctcaccgaacccgtggtgcggggc
attctcgagaagagccccagcagcaacgcgatgctgcgcacgaccaccgcgctgaccatc
gttcgcgccggcaacaaggacaacgtgctgcccgggcgcgccgaggccgccgtcaacttc
cgcatcctgccgggcgacacgctcgccagcgtcgaggcgcacctgcgcaagcagctggcc
aacgacgacatcaagatcaagcagtacccgggcaacgcggagccttcgcccgtgtcgccg
accgacagcacgggctaccgcgcgatccagcaggccgtgcgccagagcttccccgacgcg
gtggtggcccccggcctcatgaccgccgcgaccgactcgcgccacttcagcctcgtgagc
gatgccgtcttccgcttctcgccgttccggctgaagggcgaggacctggcacgcatccac
ggcaacaacgaacgcctggccatctcgaactacggcgagatgatcggcttctatcaccag
ctcctgagcaacaccaacgctgctccggcgcaatga
DBGET
integrated database retrieval system
