Variovorax sp. PMC12: C4F17_04820
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Entry
C4F17_04820 CDS
T05380
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_04820
Transporters [BR:
vam02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
C4F17_04820
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
AVQ80332
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All DBs
Position
1:complement(1051212..1052630)
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AA seq
472 aa
AA seq
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MRAPTEAPGTTGPSGMKGVPVAPAGAARPLWKVFLFFLAPMLLSNILQSLSGTLNNIYVG
QMLGVSALAAVSSFFPVMFFFIAFIIGLGAGASVLIGQAWGARDAAKAKAVAGTTLTVGV
LAGLVIAVFGGAFTTPMLASLGTPPDVLADSTRYARIMLIAMPGVFVFLLATAMLRGVGD
TVTPLLTLMISTLIGLVVTPALIRGWGGLPQLGVASGAWASVLSFAVATTWLGFRLRQRK
SPLAPDAEFLRHLRIQPQLLKAVLKIGVPTGVQMIVVALAEVVLLSMVNSYGSSATAAYG
AVNQVVAYVQFPAISIAITASILGAQAIGAGRANRLGDIAKTALLMNVVLTGSLVVLGYL
FSRHLMAFFITSEPVLEIAQTLLHIMLWSLVIFGMASALSGIMRASGSVLVPTLISIVCI
LGVEVPVAYAMSHRIGLDGIWIAYPVTFGAMLLLQTAYYQLVWRKKAIHRLV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacccactgaagcccccggcaccacgggccccagcggcatgaagggcgtgccg
gtcgcgcccgccggcgccgcgcggcctttgtggaaggtctttcttttcttcctcgcgccg
atgttgctcagcaacatcctgcaatcgctttcgggcacgctcaacaacatctacgtcggg
cagatgctcggcgtgagcgcgctggcggccgtgtcgagcttcttcccggtgatgttcttc
ttcatcgccttcatcatcggcctgggcgccggcgcctcggtgctgatcggccaggcctgg
ggcgcgcgcgacgccgccaaggccaaggccgtggccggcaccacgctcaccgtgggcgtg
ctggcgggtctcgtcatcgccgtgttcggcggcgccttcaccacgccgatgctggcttcg
ctcggcacgccgcccgacgtgctggccgactccacgcgctacgcccgcatcatgctgatc
gcgatgccgggcgtgttcgtgttcctgctggccaccgccatgctgcgcggggtgggcgac
accgtcacgccgctgctcacgctgatgatctcgacgctgatcgggcttgtggtcacgccc
gcgctcatccgcggctggggcggcctgccgcagctgggcgtggcgagcggcgcctgggcc
tcggtgctctcgttcgcggtggcgaccacctggctcggcttccggctgcgccagcgcaag
agcccgctggcgcccgacgcggagttcctgcgccacctgcgcatccagccgcagctgctg
aaggcggtgctcaagatcggcgtgcccacgggcgtgcagatgatcgtggtcgcgctggcc
gaagtggtgctgctgtcgatggtcaacagctacggctccagcgccacggccgcctacggc
gcggtgaaccaggtggtggcgtacgtgcagttcccggccatctcgatcgccatcaccgcg
tcgatcctcggcgcgcaggcgatcggcgccggccgcgccaaccggctcggcgacatcgcc
aagactgcgctgctgatgaacgtcgtgctgaccggcagcctggtggtgctgggctacctg
ttctcgcgccatttaatggcgttcttcatcacgagcgagccggtgctcgagatcgcgcag
acgctgctgcacatcatgctgtggagcctggtgatcttcggcatggcttcggcgctgtcg
gggatcatgcgcgccagcggctcggtgctggtgccgacgctgatctccatcgtctgcatc
ctgggcgtggaggtgccggtggcgtatgccatgagccaccgcatcgggctggacggcatc
tggatcgcctaccccgtgaccttcggcgcgatgctgctgctgcagaccgcgtactaccag
ctggtctggcgcaagaaggcgatccaccggctggtgtag
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