Variovorax sp. PMC12: C4F17_05125
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Entry
C4F17_05125 CDS
T05380
Name
(GenBank) sugar transporter
KO
K01991
polysaccharide biosynthesis/export protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_05125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_05125
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_05125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
Motif
Other DBs
NCBI-ProteinID:
AVQ80389
LinkDB
All DBs
Position
1:1127072..1128241
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AA seq
389 aa
AA seq
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MRTLSALALAEYRLRWLGLALLLSLGLAGCAPGFGTPGPLNYGDGNQGGGDATASAAAGK
IIPITPDLIRTQIAQRPKGVPDSIKRLFAEAPVYTIGPGDVISIIVYDHPELLPNAGAVI
AQQSDPTGVTVAPGFIVDAKGEIFFPYIGRTKVQGLTESGASELVARRIKAFVKEPQVSV
RIQSFRSQRAYVQGEVRTPGLQIFTDVPMTLSEAISRAGSFTQLGDRSHVTLTRGGVSTQ
IDLPLLQAQGFDANGIPLRNGDIVNVGTREDNRVYVMGEVRAPSALQMRLNGRLSLNEAL
GDVGGPDLTTADTGQIYVVRNTPDNPGAPQVFNLNARNPVALALADRFELQPRDVVYVDH
VPLATWSRVFSLILPSAQVINLARDTARR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctctcagccctcgccctggcggaataccgcctgcgatggctgggcctggcc
ctgctgctttccctggggctggcgggctgcgcaccgggcttcggcacgccggggccgctg
aactacggcgacggcaaccaaggcggtggggacgcgaccgcgtcggcggccgccggcaag
atcattccgatcacgcccgacctgatccgcacgcagatcgcgcagcggcccaagggcgtg
cccgactccatcaagaggctgttcgccgaagccccggtctacaccatcgggccgggcgac
gtgatcagcatcatcgtctacgaccaccccgaactgctgcccaacgcgggcgcggtgatc
gcgcagcagtcggacccgaccggcgtgaccgtggcgcccggcttcatcgtcgacgccaag
ggcgagatcttctttccgtacatcgggcgcaccaaggtgcagggcctgacggagagcggc
gcatcggaactggttgcgcggcgcatcaaggccttcgtcaaggaaccgcaggtgtcggtg
cgcatccagtcgttccgcagccagcgcgcctacgtgcagggcgaggtgcgcacgcccggg
cttcagatcttcaccgacgtgccgatgacgctttccgaagccatcagccgcgccggcagc
ttcacccagctcggcgaccgctcgcatgtcacgctcacgcgcggcggcgtatcgacgcag
atcgacctgccgctgctgcaggcgcagggcttcgacgccaacggcattccgctgcgcaac
ggcgacatcgtgaacgtcggcacccgcgaggacaaccgggtctacgtgatgggcgaagtg
cgggcgccgtcggcgctgcagatgcgcctgaacggccgcctgagcctgaacgaggcgctg
ggcgacgtgggcgggcccgacctgacgacggcggacaccggccagatctacgtcgtgcgc
aacacgccggacaaccccggcgcgccgcaggtcttcaacctcaacgcgaggaacccggtg
gcgctcgcgctggccgaccgcttcgagctgcagccgcgcgacgtggtgtacgtcgaccat
gtgccgctggccacgtggagccgcgtgttcagcctgattcttccgtcggcccaggtcatc
aacctggcccgcgacaccgcgcgccggtaa
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