Variovorax sp. PMC12: C4F17_05275
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Entry
C4F17_05275 CDS
T05380
Name
(GenBank) pyridoxal-5'-phosphate-dependent protein subunit beta
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00260
Glycine, serine and threonine metabolism
vam00290
Valine, leucine and isoleucine biosynthesis
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4F17_05275
00290 Valine, leucine and isoleucine biosynthesis
C4F17_05275
Enzymes [BR:
vam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
C4F17_05275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
AVQ80415
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All DBs
Position
1:complement(1159804..1160763)
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AA seq
319 aa
AA seq
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MSENTTPITLDDYRAAHARVRPYIRHTPLVDAHPWVPGGAAQVRFKAECNQVTGSFKARG
AFNRVLNLSHDVRRQGLATASGGNFGAAVAYVGKTLGLPANVFVMNTSTPITRARIESHG
ARLTVHGDFWDQSWDAAGANVAEHGGALLHPYADRDVVIGQGTTALEIIDEWPEVETLVV
SIGGGGLLAGIAQAAKLLKPSIRVIGVEAAGCPTLHTCRKEGRIVKLENVKTRVPILAAR
STEPLNFELIEKYVDEIVLVDEEVIEDAARSAWQHAGLAIELGAATALAAVSQRCFERRD
EEKIAVVLCGSGSDGMPKA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacaccaccccgatcacgctggacgactaccgcgcggcccatgcccgcgtg
cggccctacatccgccacacgccgctggtcgatgcgcacccctgggtgcccggcggcgcg
gcgcaggtgcgcttcaaggccgagtgcaaccaggtcaccggctccttcaaggcgcgcggc
gctttcaaccgcgtgctcaatctgtcgcacgacgtgcgcaggcaggggctggccaccgcg
tcgggcggcaacttcggcgcggccgtggcctacgtcggcaagacgctgggcctgccggcc
aacgtgttcgtgatgaacaccagcacgccgatcacgcgggcgcgcatcgagagccacggc
gccaggctcaccgtgcacggcgacttctgggaccagagctgggacgccgccggcgccaac
gtggccgagcacggcggcgcgctgctgcatccgtatgccgaccgcgacgtggtgatcggg
cagggcacgaccgcgctggaaatcatcgatgaatggcccgaggtcgagacgctggtggtg
tccatcggcggcggcggcctgctcgcgggcattgcgcaggcggccaagctgctcaagccg
tcgatccgcgtcatcggcgtggaagcggcgggctgccccacgctccacacctgccgcaag
gaaggccgcatcgtgaagctggagaacgtgaagacgcgcgtgcccatcctcgcggcgcgc
tcgaccgagcccttgaacttcgagctgatcgagaagtacgtcgacgagatcgtgctggtc
gatgaagaagtcatcgaggacgcggcccgttccgcctggcagcacgcgggactggccatc
gagctgggcgcggccaccgcgctggcggccgtgagccagcgctgcttcgagcgccgcgac
gaagagaaaatcgccgtcgtgctgtgcggcagcggcagcgacggcatgcccaaggcctga
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