Variovorax sp. PMC12: C4F17_05570
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Entry
C4F17_05570 CDS
T05380
Name
(GenBank) two-component system sensor histidine kinase/response regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CHASE3
HATPase_c
HisKA
GAF_2
GAF
DUF3974
IFT57
TPR_MLP1_2
GAS
EzrA
HAUS-augmin3
Fez1
Motif
Other DBs
NCBI-ProteinID:
AVQ80464
UniProt:
A0A2P1V5K2
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All DBs
Position
1:1222003..1225515
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AA seq
1170 aa
AA seq
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MNTPSAIDPEDFDRLLSRNLKLPLIGGIFGAVVFVALILFLLNTIGWVEHTDRVTRAASE
LQRQSIDMETGMRGFLITGDETFLEPYQSALPRMKSDTAALRELVSDNRQQVERIDRIAS
IQATWTEFARSLIAARRAGEDAQAQVRLGRGKRLTDDMRAEFTAFIDTEQALRFQRNNDA
NRTAWWVICLFLLFTLTLTGLVAYFGRRQLVRLSDSYDVVLKEQSAHAERLSHEAWLRGA
QTELVGELVGELSAPDMGRKVLAFFSRHLGTSVGAMYVRERHGPLRRAASYGFSSAAEAT
PQVFSPTESLVGQAAAERRRMVVEPVDADYLKVNSGLGEMTPKAVLLLPVGSDGMVNGVV
ELGLPAPLDERGSQLLDVVADDIGTSLAAARYREQLQDVLAETQQLNEELQVQQEELRTA
NEELEEQSRALRASQAMLENQQAELEQTNSQLSERTEALDQRNTALRRVQRDLEDRADEL
QRASRYKSEFLANMSHELRTPLNSALILAKLLGDNPQGNLTQEQVKFAESIYSSGNDLLV
LINDILDISKVEAGKLEVVPEDVSLRRLAESLETTFRPLAKQKNLSFRLEIKPDAPASLV
TDRQRVEQILKNLLSNALKFTDRGEVALVVSAAADGGASFAVTDSGIGIDPQQHELIFEA
FRQADGTTSRRYGGTGLGLSISRDLTHLLGGTLAVQSQPGQGSTFVLQLPARAPQAPGNA
PGNASAAPSAVYTPKPAHAPVGLAPAAPAVPLPPHPPSPVPAPQFADDRSLPRDQVRRVL
VIEDEPQFAHILYDLAHELGYRCLVAHGAADGFELATQFVPDAILLDMRLPDSTGLDLLQ
RLKDSPHTRHIPIHVVSAADNAQGAALQMGAIGYALKPTTRDELMRVFARLEDKLTQKVK
VVLLVEDDELQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLPDMQGSE
LLKAMAAEEIVSFPPVIVYTGRNLTRDEETELQRYSRSIIIKGARSPERLLDEVTLFLHK
VEAELSSERQGMLKTARGRDRIFEGRTILLVDDDVRNIFALTSALEQRGAAVEIGRNGRE
ALEKLDQVSEIDLVLMDVMMPEMDGLEATRRMRADPRFEKMPVIAITAKAMKDDREQCLA
AGANDYLAKPVDLERLFSLLRVWMPKMERL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaacactccctccgcgatagaccccgaagacttcgaccgtctgctgagccgcaacctc
aagctccccctgatcggcggcatcttcggcgccgtggtgttcgtcgcgctgatcctgttc
ctgctcaacaccatcggctgggtcgagcacaccgaccgcgtgacccgtgccgccagcgag
ctgcagcgccagagcatcgacatggagaccggcatgcgcggcttcctgatcaccggtgac
gagacgttcctcgagccctaccagagtgccctgccccgcatgaagtccgacacggccgca
ttgcgcgaattggtgtcggacaaccgccagcaggtcgagcgcatcgaccgcatcgcgtcc
atccaggccacctggaccgaattcgcgcgcagcctgatcgccgcgcgccgcgccggagag
gacgcccaggcccaggtgcggctgggccgcggaaagcggctgaccgacgacatgcgcgcc
gagttcaccgccttcatcgacaccgaacaggcgctgcgcttccagcgcaacaacgacgcc
aaccgcaccgcgtggtgggtgatctgcctgttcctgctgttcacgctgacgctgaccggg
ctggtggcctacttcggccgacggcagctggtgcggctttccgacagctacgacgtggtg
ctgaaggagcagtcggcgcacgccgaacgcctgtcgcatgaggcctggctgcgcggcgcg
cagaccgaactggtgggcgaactggtgggcgagctcagcgcgccggacatggggcgcaag
gtcctggctttcttctctcgccacctgggcacgtcggtcggcgccatgtatgtgcgcgag
cggcatgggccgctgcgtcgggccgcgagctacggcttctccagcgcggccgaggccacg
ccgcaggttttctcgccgaccgagagcctggtgggccaggccgcggcggagcgccgccgc
atggtggtcgagcccgtggatgccgactacctgaaggtcaactcgggcctgggcgagatg
acgcccaaggccgtactgctgctgccggtcggcagcgacggcatggtcaacggcgtggtc
gaactgggcctgccggccccgctggacgagcgcggcagccagctgctggacgtggtggcc
gacgacatcggcacctcgctggcggcggcgcgataccgcgagcagctgcaggacgtgctg
gcagagacccagcagctcaacgaggaactgcaggtgcagcaggaagagctgcgcaccgcc
aacgaagaactcgaggagcagtcgcgtgcgctgcgtgcctcccaggccatgctggagaac
cagcaggccgagctggaacagaccaacagccagctgtcggagcgcaccgaggcgctggac
cagcgcaacaccgcgctgcgccgcgtgcagcgcgacctggaggaccgcgccgacgaactg
cagcgcgcgagccgctacaagtcggagttcctggcgaacatgtcgcacgagctgcgcacg
ccgctgaacagcgcgctcattctggccaagctgctgggcgacaacccgcagggcaacctg
acgcaggagcaggtgaagttcgcggagtcgatctattcgtcgggcaacgacctgctggtg
ctgatcaacgacatcctcgacatctcgaaggtggaggccggcaagctcgaagtggtgccc
gaagacgtgtccctgcgccggctcgccgagagcctggaaaccaccttccgcccgctggcg
aagcagaagaacctgagcttccgcctcgagatcaagcccgatgcgccagcctcgctggtg
accgaccgccagcgcgtggagcagatcttgaagaacctgctgtcgaacgcgctcaagttc
accgaccgcggcgaggtggcgctggtggtgtctgccgcggcggacggcggcgccagcttt
gcagttaccgactcgggcatcggcatcgaccctcagcagcacgagctgatcttcgaggcc
ttccgccaggccgacggcaccaccagccggcgctacggcggcacggggctgggcctgtcg
atctcgcgcgacctcacccatctgctgggcggcacgctcgcagtgcagagccagccgggc
cagggcagcaccttcgtgctgcagcttccggccagggcgccccaggcaccgggtaatgca
ccgggcaatgcatcggcagcgccctcggccgtctacacgcccaagccggcgcacgccccg
gtcggcctggcaccggccgcgcctgccgtgccgctcccgccccatccgccctccccggtg
cccgcgccgcagttcgcggacgaccgctcgctgccgcgcgaccaggtgcgccgcgtgctg
gtgatcgaggacgaaccgcagttcgcgcacatcctctacgacctggcgcacgaactcggc
taccgctgcctggtggcgcacggcgcggccgacggcttcgagctggccacgcaattcgtg
cccgacgccatcctgctggacatgcgcctgcccgacagcaccggcctggacctgctgcaa
cgcctgaaggactcgccgcacacccgccacatcccgatccacgtggtctcggccgccgac
aacgcgcagggtgcggcgctgcagatgggcgccatcggctacgcgctgaagccgaccacg
cgcgacgagctgatgcgcgtgttcgcgcggctggaagacaagctcacccagaaggtcaag
gtggtgctgctggtggaagacgacgagctgcagcgcgagagcgtgatgcgcctgatcgag
gacgacgacatcgagatcgtggccgtgggctcgggcgaagaagcgctggagctgctgcgc
acccgtgtcttcgactgcatgatcaccgacctgcggctgcccgacatgcagggcagcgag
ctgctcaaggccatggcggcggaggagatcgtgtcgttcccgccggtcatcgtgtacacc
gggcgcaacctcacgcgcgacgaggaaaccgagctgcagcgctactcgcgctcgatcatc
atcaagggcgcgcgctcgcccgagcgcctgctcgacgaggtgacactgttcctgcacaag
gtggaagccgaactgtcgagcgagcgccagggcatgctcaagacggcgcgcggacgcgac
cgcatcttcgagggccggaccatcctgctggtggacgacgacgtgcgcaacatcttcgcg
ctgacgagcgcgctcgagcagcgcggcgcggccgtggaaatcggccgcaacggccgcgag
gcgctggaaaaactcgaccaggtgagcgagatcgacctggtgctgatggacgtgatgatg
ccggagatggacggcctggaagccacgcgccgcatgcgcgccgacccgcgcttcgagaag
atgccggtcatcgccatcaccgccaaggccatgaaggacgaccgcgagcagtgcctggcc
gcgggcgccaacgactacctcgccaagcccgtggacctggaacggttgttctcgctgctg
cgggtgtggatgccgaaaatggagcgcctgtga
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