Variovorax sp. PMC12: C4F17_05660
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Entry
C4F17_05660 CDS
T05380
Name
(GenBank) two-component sensor histidine kinase
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HisKA_3
Motif
Other DBs
NCBI-ProteinID:
AVQ80480
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Position
1:complement(1239583..1241088)
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AA seq
501 aa
AA seq
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MKQWLRAQGGWWLAWVVLTVAGAVWIARAELAQMHQDFETDVRIAHRLMSQQMVQYDAVL
ATLALLEPSTGADHPEQRLPSVYSSILRVHRRERDEPWPDAGPAASATPAALAAAEARSR
SQHRADLASLDLAHGRYVLVMGATPFSYALDIDLAGSVPWRDWPMNPQVSPVRLSLQRDG
QQLVLQPGRPTAGGWRFGLTKPLASPSQPFDLVAERQVGWGELPWRGIGAWAVATALLLA
GLWMAQRQRIARRRAEELLRLGQVARLNALGELSAGLAHELNQPLTAVLANAQAARRLLD
DEPPDLATARDAMGQAVEQARRAAGVVGRLRRVIERPEAAGDARPLVLQEVVRSAMHLLA
PEFSRRGIVAQFDPTAQAPVRVQAEAVALEQIVHNLLMNALQALELVPAGDRRLAIAVGR
NGEEGVLTVTDNGRGIAPDALPRLFEPFFSTREGGLGLGLSLSETLASGMGGSLSAANAS
PRGARFTLLLPLVAPPAERAP
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtggttgcgtgcgcaaggtggatggtggctggcatgggtggtgctcaccgtg
gctggcgccgtctggatcgcgcgcgcagaactggcgcagatgcaccaggacttcgagacc
gacgtgcgcatcgcgcaccggctcatgagccagcagatggtgcagtacgacgccgtgctg
gccacgctggcgctgctggagcccagcaccggtgccgaccatccagagcagcgcctgccg
tcggtgtattcgtcgatcctgcgggtgcatcgccgcgagcgcgacgagccctggccggac
gccggtccggcggcgagcgccacgcccgccgcgctggccgccgccgaggcccgctcgcgc
agccagcatcgcgccgacctcgcatcgctggacctggcgcacggccgctatgtgctggtg
atgggcgccacgccgttcagctacgcgctcgacatcgacctggccggctcggtgccctgg
cgcgactggcccatgaacccgcaggtcagcccggtgcggctgagcctgcagcgtgacggc
cagcaactggtgctgcagcccggccggcccaccgcgggcggctggcgcttcggcctgacc
aagccgctggcgtcgccgagccagcccttcgacctcgtggccgagcggcaggtgggctgg
ggcgagctcccgtggcgcggcatcggcgcctgggccgtcgcgacggcgctgctgctggcc
ggactgtggatggcgcagcgccagcgcatcgcgcggcgccgggccgaagagctgctgcgg
ctcgggcaggtcgcgcggctcaatgcgctgggcgagctgtcggccgggctggcgcatgaa
ctcaaccagccgctgacggcggtgctggccaacgcgcaggccgcgcgccgcctgctggac
gacgagccgccggacctggccaccgcacgcgacgcgatgggccaggcggtcgagcaggcg
cgccgcgcggcgggcgtcgtggggcgcctgcggcgggtgatcgagcggcccgaggctgcg
ggagacgccaggccgctggtgctgcaggaggtggtgcgcagtgccatgcacctgctcgcg
ccggagttcagccggcgcggcatcgtcgcgcagttcgaccccacggcgcaggcgccggtg
cgggtgcaggccgaagccgtggcgctggagcagatcgtgcacaacctgctgatgaacgca
ttgcaggcgctcgagctggtgcccgccggcgaccggcgcctggccatcgcggtggggcgc
aacggcgaggagggcgtgctgaccgtcaccgacaacggccggggcatcgcgcccgatgcc
ttgccgcgccttttcgagccctttttcagcacgcgcgaaggcgggctgggcctcggcctg
agcctgagcgaaacgctggccagcggcatgggcggcagcctgagcgcggccaatgcgtcg
ccgcgcggcgcgcgcttcacgctgttgctgccgctggtcgcgccgcctgcggagcgcgcg
ccatga
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