Variovorax sp. PMC12: C4F17_05780
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Entry
C4F17_05780 CDS
T05380
Name
(GenBank) IMP dehydrogenase
KO
K00088
IMP dehydrogenase [EC:
1.1.1.205
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00230
Purine metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01232
Nucleotide metabolism
Module
vam_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
C4F17_05780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_05780
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.205 IMP dehydrogenase
C4F17_05780
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C4F17_05780
Exosomal proteins of breast cancer cells
C4F17_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMPDH
CBS
NMO
FMN_dh
His_biosynth
Glu_synthase
DeoC
ThiG
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AVQ80499
LinkDB
All DBs
Position
1:complement(1259704..1261173)
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AA seq
489 aa
AA seq
DB search
MRLLGKALTFDDVLLVPAFSQVLPKDTSLATKLSRNITLNLPLVSAAMDTVTEARLAIAI
AQEGGMGIVHKNLTAQQQAAEVARVKRYESGVLRDPVVITPTHSVRQVMALSEQLGISGF
PVVDAGKVVGIVTGRDLRFENRYDVPVSEIMTRREKLITVPDGTTLAEAKALLNKYKLER
LLVINGDWELKGLITVKDITKQTSFPNAARDANGRLRVGAAVGVGDGTEERVEALVKAGV
DAIVVDTAHGHSAGVIERVRWVKKNYPQVDVIGGNIATGDAARALADVGADAVKVGIGPG
SICTTRIVAGVGVPQIMAVDSVATALQGTGIPLISDGGVRYSGDIAKAIAAGASTVMMGS
MFAGTEEAPGEIVLYQGRSYKSYRGMGSIGAMQQGSADRYFQESTTGNPNTDKLVPEGIE
GRVPYKGSIVSIVYQMAGGVRASMGYCGCATIEDMQNKAEFVEITTAGIRESHVHDVQIT
KEAPNYRAE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttctcggcaaagcgctcaccttcgacgacgtgttgttggtgccagcgttctcc
caggtcctgcccaaggacacctccctcgccaccaaactctcccgcaacatcacgctgaac
ctgccgctcgtctcggcggccatggacaccgtgacggaagcccgccttgcgatcgccatc
gcgcaggagggcggcatggggatcgtgcacaagaacctcacggcgcagcagcaggccgcg
gaagtggcccgcgtgaagcgatacgaatcgggcgtgctgcgcgacccggtcgtgatcacc
cccacgcactcggtgcgccaggtgatggcgctgtccgagcagctcggcatctcgggcttc
ccggtggtcgacgccggcaaggtggtcggcatcgtcacggggcgcgacctgcgcttcgag
aaccgctacgacgtgcccgtcagcgaaatcatgacgcggcgcgagaagctcatcaccgtg
cccgacggcaccacgctggccgaagccaaggcactgctcaacaagtacaagctcgagcgc
ctgctggtcatcaacggcgactgggagctcaagggcctgatcaccgtcaaggacatcacc
aagcagaccagcttccccaacgccgcgcgcgacgccaacggccgcctgcgcgtgggcgct
gcggtcggcgtgggcgacggcaccgaggagcgcgtcgaggcgctggtgaaggccggcgtc
gacgccatcgtggtcgacaccgcccacggccacagcgccggcgtgatcgagcgcgtgcgc
tgggtcaagaagaactatccgcaggtcgacgtcatcggcggcaacatcgccaccggcgac
gccgcgcgcgcgctggccgacgtcggtgccgacgccgtcaaggtcggcatcggccccggc
tccatctgcaccacccgcatcgtggccggcgtgggcgtgccgcagatcatggcggtcgac
agcgtggccaccgcgctgcagggcacgggcattccgctgatctccgacggcggcgtgcgc
tactcgggcgacatcgccaaggctatcgcggccggcgccagcaccgtgatgatgggcagc
atgttcgccggcaccgaagaggcgccgggcgaaatcgtgctgtaccagggccgcagctac
aagagctaccgcggcatgggctccatcggcgcgatgcagcagggcagtgccgaccggtac
ttccaggaatcgaccaccggcaaccccaacaccgacaagctggtgcccgagggcatcgaa
ggccgcgtgccctacaagggctcgatcgtctccatcgtctaccagatggccggcggcgtg
cgcgccagcatgggctactgcggctgcgcgaccatcgaggacatgcagaacaaggcagag
ttcgtcgagatcaccacggccggcattcgtgagagccacgtccacgacgtgcagatcacc
aaggaagcgccgaactaccgcgctgaataa
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