Variovorax sp. PMC12: C4F17_05845
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Entry
C4F17_05845 CDS
T05380
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vam03012
]
C4F17_05845
03029 Mitochondrial biogenesis [BR:
vam03029
]
C4F17_05845
Translation factors [BR:
vam03012
]
Eukaryotic type
Initiation factors
MTIFs
C4F17_05845
Prokaryotic type
C4F17_05845
Mitochondrial biogenesis [BR:
vam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
C4F17_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
IF2_assoc
MMR_HSR1
GTP_EFTU_D2
Ras
FeoB_N
Arf
Roc
MMR_HSR1_Xtn
RsgA_GTPase
DDRGK
Motif
Other DBs
NCBI-ProteinID:
AVQ80512
LinkDB
All DBs
Position
1:complement(1270405..1273395)
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AA seq
996 aa
AA seq
DB search
MSSTTVAEFANELKKTPETLLDQLKSAGVPKAAVTDALTEADKQRLLGHLKASHGTVEPE
RKKITLTKKSTSEIKQADATGRARTIQVEVRKKRTFIQRDDGHPASPEAAPQAAEAPAAA
PAAPRVDEAELARREEEARRQAELIRRQEEELAEKRRLREEAEAREREQAEKAERAEKAE
QEAARAAAEKKAAAEAAALAAAAKSTPAKPAAPAPAPAVTAAAAAAAAAEQQAADTKLAA
QNAAAQAKEDAKAKAAAESKARADEEAARAKDLDERRRKALAEAEAIRAMMNAPARVLVP
HKAPEKPQPEKAAVKGTLHKPATPAARPGAPAAPGAAAAPGAAAGAGKEVKSAKLSSSWA
GDPAKKKEIKTRGDASGGVGRGNWRGGPRGRRGNDRGGHDEQHAPAAPVEARILEVHVPE
TITVAELAHKMAVKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAALDDPE
AFTDEDVSAQTAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHV
QTERGMVSFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPI
VVAINKIDKPDANLDRVKQELVAEEVVPEEYGGDVPFVGVSAKTGQGIDDLLEQVLLQAE
VLELKAPVDAAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVRAMLDED
GKSTKAAGPSIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAAN
LQNMFTDLSAGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQIVYAGVGGISESDI
NLAIASKAVVIGFNVRADAGARKLAEGNGIQLNYYSIIYDAVDEIKVAMSGMLAPERREE
IIGSAEIRTVFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVVYTGEIDSLKRLKDDVR
EVREGFECGIKLKNYNDIKEGDQLEFFEIKEIARTL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaccactgtcgccgagttcgcgaacgagctcaagaagactcccgaaaccctg
cttgaccagctcaagagcgcaggcgtgcccaaagcggccgtcaccgatgcgctcaccgag
gctgacaagcagcgcctgcttggccacctcaaggccagccacggcactgtcgagcccgag
cgcaagaagatcacgctgaccaagaagtcgaccagcgagatcaagcaggccgacgccacc
ggccgcgcccgcaccatccaggtcgaggtgcgcaagaagcgcaccttcatccagcgcgac
gacggccatccggcttcgcccgaggctgcgccacaggcggctgaagcgcccgccgcggca
cccgccgctccccgcgtcgacgaggccgaactggcccgccgcgaggaagaggcgcgccgc
caggccgaactgatccgccgccaggaagaagaactggccgagaagcgccgcctgcgcgaa
gaagccgaagcgcgcgaacgcgaacaggccgagaaggccgagcgcgccgagaaggccgag
caggaagctgcgcgcgccgccgccgagaagaaggccgccgccgaggcagccgctctcgcc
gccgccgccaagagcacccccgccaagccggctgcgcccgcacctgctcccgcagtgacg
gcagcggccgccgcggcagccgccgccgagcagcaggctgccgacaccaagctcgccgcg
cagaacgccgccgcgcaagccaaggaagacgcgaaggccaaggccgccgccgaatcgaag
gcccgtgccgacgaagaagccgctcgtgccaaggacctcgacgagcgccgccgcaaggcc
ctggccgaagccgaagccattcgcgccatgatgaacgcaccggcccgcgtgctggtgccg
cacaaggcgcccgagaagccgcagcccgaaaaggccgcggtcaagggcacgctgcacaag
ccggccacgcctgcggcccgccccggcgcgcctgcggcgcccggcgctgcggccgcaccc
ggcgcagcagccggtgccggcaaggaagtcaagtccgccaagctctcttcgagctgggcc
ggcgatcctgccaagaagaaggaaatcaagacccgcggcgacgccagcggcggtgtcggt
cgcggcaactggcgcggaggcccgcgtggtcgccgtggcaacgaccgcggcggtcacgac
gagcagcatgcaccggccgcaccggtcgaggcgcgcattctcgaagtgcacgtgcccgaa
accatcaccgtggcggaactcgcccacaagatggccgtgaaggcgcaggaagtcatcaag
cagctgatgaagctcggccagatggcgaccatcaaccagtcgctcgaccaggacaccgca
atgatcctggtggaggaaatgggccacaacgcggtggttgccgcgctggacgatcccgaa
gccttcaccgacgaggacgtgtcggcgcaaacggcggaagccctgccgcgcgctccggtc
gtgaccgtcatgggccacgtcgaccacggcaagacctcgctgctggactacatccgccgc
gccaaggtcgccgctggcgaagccggcggcatcacgcagcacatcggcgcgtaccacgtg
cagaccgaacgcggcatggtgtcgttcctcgacaccccgggtcacgaggccttcacggcc
atgcgtgcccgcggtgcgcaggccaccgacatcgtgatcctggtggtggctgccgacgac
ggcgtcatgccccagaccaaggaagccatcaagcacgcgaaggcggcgggtgtgccgatc
gtggtcgcgatcaacaagatcgacaagcccgatgccaacctggaccgcgtcaagcaggaa
ctggtggcagaggaggtcgtgcccgaagagtacggcggcgacgttccgttcgtcggcgtg
tcggccaagaccggccagggcatcgacgacctgctcgagcaggtgctgctgcaggccgaa
gtgctggaactcaaggcgccggtggatgccgccgccaagggcctcgtcatcgaagcccag
ctcgacaagggccgcggcccggtcgccaccgtgctggttcagtccggcacgctcaagacc
ggcgacgtggtgctggccggctccacctatggccgcgtgcgcgccatgctggacgaagac
ggcaagtcgaccaaggccgccggcccgtcgatcccggtcgaaatccagggtctgaccgaa
gtgccgcaggcgggcgacgagttcatggtgatgagcgacgagcgccgtgcgcgcgaaatc
gcgacctaccgtgccggcaagttccgcaacaccaagctggcgaaggcgcaagccgcgaac
ctgcagaacatgttcaccgacctgtcggccggcgaagtgcagacgctgcgcatcatcatc
aaggccgacgtgcagggctcgcaggaagcattggcccagtcgctgctcaagctggcgacc
gacgaggtcaaggtgcagatcgtgtatgccggcgtgggtggtatcagcgaaagcgacatc
aacctggccatcgcctcgaaggcggtcgtcatcggcttcaacgtgcgcgccgatgccggt
gcgcgcaagctggccgaaggcaatggcatccagctgaactactacagcatcatttacgac
gccgtggacgagatcaaggtcgcgatgtcgggcatgctggcaccggagcgccgcgaggaa
atcatcggctcggccgagatccgcacggtgttcgtggcctcgaagatcggtaccgtcgcg
ggttcgtacatcacctcgggctcggtcaaccgcagtgcgcatttccgcctgctgcgcgac
aacgtggtggtctacaccggcgaaatcgactcgctcaagcgtctcaaggacgatgtgcgc
gaagtccgcgaaggttttgagtgcggtatcaagctcaagaactacaacgacatcaaagag
ggcgatcagctcgaattcttcgagatcaaggaaatcgcccggacgctgtaa
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