KEGG   Variovorax sp. PMC12: C4F17_05865
Entry
C4F17_05865       CDS       T05380                                 
Name
(GenBank) microcin ABC transporter ATP-binding protein
  KO
K13896  microcin C transport system ATP-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_05865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_05865
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Microcin C transporter
    C4F17_05865
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_22 AAA_25 AAA_29 ABC_ATPase AAA_16 DEAD Pox_A32 CbiA nSTAND1 AAA_7
Other DBs
NCBI-ProteinID: AVQ80516
LinkDB
Position
1:complement(1276975..1278618)
AA seq 547 aa
MSENNNTKTGQPLIDVKGLRVGFGGKEVVHGIDFQIATGEKLALVGESGSGKTVTALSLL
RLVQNADVAGEARLFGPQREQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVG
DQIAEVLELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALA
CKPRLLLADEPTTALDVTVRAQILELLADLQRKYGMAVLLITHDLNLVRRFADRVVVMEN
GHIVEHGAVAPVFDAPQHPYTRKLIDSHPTRDVAAVAASPGALPVLEAKALRVIYPVPKP
GIGGWFSKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKD
WAVDRASDLRLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGAEARRTRALAAL
ADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVL
GLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILENGPVERVLDEPEHPYTKKL
VAAALLE
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgagcgagaacaacaacaccaaaaccggccagcccctgatcgacgtgaagggcctgcgc
gtcgggttcggcggcaaggaagtggtgcacggcatcgacttccagatcgccacgggggaa
aagctggcgctcgtcggcgagtcggggtcgggcaagaccgtcaccgcgctgtcgctgctg
cggctggtgcagaacgccgacgtggccggcgaggcgcggctcttcggcccgcagcgcgag
caagcgccgcgcgacctgttgtcgattccggagcgcgagctgcgcggcatccgcggcaag
gagatcgcgatgatcttccaggagccgatgaccgcgctcaacgcgctctacagcgtgggc
gaccagattgccgaggtgctcgagctgcacgaagcgttgtcggcccgcgccgcgcaggcg
gcggcagtgcagctgctggccgacaccggcattcccgagccggcgcggcgggcgagggcg
tttccgcaccagttgtcgggcggccagcgtcagcgcgcgatgatcgcgatggcgctcgcc
tgcaagccgcgcctgctgctggccgacgaaccgaccacggcactcgacgtgacggtgcgc
gcgcagatcctggagctgctcgccgatctgcagcgcaaatacggcatggccgtgctgctg
atcacgcacgacctgaacctggtgcgccgcttcgccgaccgcgtggtcgtgatggagaac
gggcacatcgtcgagcacggcgccgtggccccggtgttcgatgcgccgcagcacccctat
acccgcaagctgatcgacagccatccgacgcgcgacgtcgccgcagtggcggccagccct
ggcgccttgccggtgctcgaagccaaggcgctgcgcgtgatctatccggtgcctaagccc
ggcatcggcggctggttcagcaagggcgagttcgtggcggtgcagggtgcggatttccgc
atcgtgccgggcgagacgctgggcgtggtcggcgagtcgggctcgggcaagtcgacgctc
gcgctggcggcgctgggcctgctgaagcaccagggagcgctgaagattgccggcaaggac
tgggcggtcgaccgcgcgtccgacctgcggttgcgccgggtgatgcaggtcgtgttccag
gacccgttctcgtcgctgtcgccccgcatgacggtggaacagatcgtgggcgaggggctg
cgcgtgcatgcgcccgaacttggcgccgaggcgcgccggacccgtgcgctcgccgcgctg
gccgacgtggggctgaccgaatcgcagtttccgtcgctgctcgaccgctatccgcatgaa
ttctctggcgggcagcggcagcggctggccattgcgcgggcgctgatcgtcgatccgcag
ctgctggtgctcgacgagccgaccagcgcgctcgacgtgacgatccagaagcaggtgctg
ggcctgttgcagcggctgcagcgcgagcgcgggctgagctacctgctgatcacgcacgac
gtggaggtgatccgggccatggcccatcaggtcatcgtgatgaaggacggagccattctg
gaaaacgggccggtcgagcgcgtgctcgacgagcccgagcatccctatacaaaaaaactg
gtggccgccgcgctgctggaataa

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