Variovorax sp. PMC12: C4F17_05865
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Entry
C4F17_05865 CDS
T05380
Name
(GenBank) microcin ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_05865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_05865
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
C4F17_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_22
AAA_25
AAA_29
ABC_ATPase
AAA_16
DEAD
Pox_A32
CbiA
nSTAND1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVQ80516
LinkDB
All DBs
Position
1:complement(1276975..1278618)
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AA seq
547 aa
AA seq
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MSENNNTKTGQPLIDVKGLRVGFGGKEVVHGIDFQIATGEKLALVGESGSGKTVTALSLL
RLVQNADVAGEARLFGPQREQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVG
DQIAEVLELHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALA
CKPRLLLADEPTTALDVTVRAQILELLADLQRKYGMAVLLITHDLNLVRRFADRVVVMEN
GHIVEHGAVAPVFDAPQHPYTRKLIDSHPTRDVAAVAASPGALPVLEAKALRVIYPVPKP
GIGGWFSKGEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKD
WAVDRASDLRLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGAEARRTRALAAL
ADVGLTESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVL
GLLQRLQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILENGPVERVLDEPEHPYTKKL
VAAALLE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacaacaacaccaaaaccggccagcccctgatcgacgtgaagggcctgcgc
gtcgggttcggcggcaaggaagtggtgcacggcatcgacttccagatcgccacgggggaa
aagctggcgctcgtcggcgagtcggggtcgggcaagaccgtcaccgcgctgtcgctgctg
cggctggtgcagaacgccgacgtggccggcgaggcgcggctcttcggcccgcagcgcgag
caagcgccgcgcgacctgttgtcgattccggagcgcgagctgcgcggcatccgcggcaag
gagatcgcgatgatcttccaggagccgatgaccgcgctcaacgcgctctacagcgtgggc
gaccagattgccgaggtgctcgagctgcacgaagcgttgtcggcccgcgccgcgcaggcg
gcggcagtgcagctgctggccgacaccggcattcccgagccggcgcggcgggcgagggcg
tttccgcaccagttgtcgggcggccagcgtcagcgcgcgatgatcgcgatggcgctcgcc
tgcaagccgcgcctgctgctggccgacgaaccgaccacggcactcgacgtgacggtgcgc
gcgcagatcctggagctgctcgccgatctgcagcgcaaatacggcatggccgtgctgctg
atcacgcacgacctgaacctggtgcgccgcttcgccgaccgcgtggtcgtgatggagaac
gggcacatcgtcgagcacggcgccgtggccccggtgttcgatgcgccgcagcacccctat
acccgcaagctgatcgacagccatccgacgcgcgacgtcgccgcagtggcggccagccct
ggcgccttgccggtgctcgaagccaaggcgctgcgcgtgatctatccggtgcctaagccc
ggcatcggcggctggttcagcaagggcgagttcgtggcggtgcagggtgcggatttccgc
atcgtgccgggcgagacgctgggcgtggtcggcgagtcgggctcgggcaagtcgacgctc
gcgctggcggcgctgggcctgctgaagcaccagggagcgctgaagattgccggcaaggac
tgggcggtcgaccgcgcgtccgacctgcggttgcgccgggtgatgcaggtcgtgttccag
gacccgttctcgtcgctgtcgccccgcatgacggtggaacagatcgtgggcgaggggctg
cgcgtgcatgcgcccgaacttggcgccgaggcgcgccggacccgtgcgctcgccgcgctg
gccgacgtggggctgaccgaatcgcagtttccgtcgctgctcgaccgctatccgcatgaa
ttctctggcgggcagcggcagcggctggccattgcgcgggcgctgatcgtcgatccgcag
ctgctggtgctcgacgagccgaccagcgcgctcgacgtgacgatccagaagcaggtgctg
ggcctgttgcagcggctgcagcgcgagcgcgggctgagctacctgctgatcacgcacgac
gtggaggtgatccgggccatggcccatcaggtcatcgtgatgaaggacggagccattctg
gaaaacgggccggtcgagcgcgtgctcgacgagcccgagcatccctatacaaaaaaactg
gtggccgccgcgctgctggaataa
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