Variovorax sp. PMC12: C4F17_05870
Help
Entry
C4F17_05870 CDS
T05380
Name
(GenBank) peptide ABC transporter permease
KO
K13895
microcin C transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_05870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_05870
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
C4F17_05870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AVQ80517
LinkDB
All DBs
Position
1:complement(1278618..1279658)
Genome browser
AA seq
346 aa
AA seq
DB search
MVSGSTHISPGRRAWLRFKRNRLGFWSLVLFTIMVVLSLFAEVLSTDKPLVLRYEGRTYF
PVLRDYSEKTFGGDFETPADYLDPYIRDRITKGDNWAIYAPNPYGPKTLNYFAKAPSPAA
PTADNIFGTDDRGRDLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGAVQGYFAGKTDLAF
QRFIEIWSSMPELYLLIIFSAIFAPSVALLLILLSLFGWMGLADYVRAEFLRNRQMDYVR
AARALGVSNLQIMWRHILPNSMVPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGEL
LSQGKANIDAWWISISTFGVLVVTLMLLTFMGDALRDALDPRKADK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcggctctacccatatctcgcccggccgccgcgcctggcttcgcttcaagcgc
aaccggctcggtttctggagcctggtgctcttcaccatcatggtggtgctgagcctgttc
gccgaggtgctgtcgaccgacaagccgctggtgctgcggtacgaaggccgcacttatttt
ccggtgctgcgcgactactccgagaagactttcggcggcgacttcgagacgcccgccgac
tacctcgatccctacatccgcgaccggatcaccaagggcgacaactgggcgatctatgcg
cccaacccttacggcccgaagacgctcaactactttgccaaggcgcccagtccggcagcc
ccgacggccgacaacatcttcggcaccgacgaccgcggccgcgacctgctcgcgcagctg
atctacggctttcgcgtgagcgtgctgttcggcctggcgctcactgccatcggcacggtg
ctgggggtggcggcgggggcggtgcagggctatttcgcgggcaagaccgacctcgcgttc
cagcgcttcatcgaaatctggagctcgatgccggagctctacctgctgatcatcttcagc
gccatcttcgcgcccagcgtggcgctgctgctcatcctgctgagcctgttcggctggatg
ggcctggccgactatgtacgcgccgagttcctgcgcaaccgccagatggactacgtgcgt
gccgcgcgcgccctgggcgtgagcaacctgcagatcatgtggcgccacatcctgcccaac
agcatggtgccggtcgtcaccttcctgccgttccgcatgagcgcggccatcctggcgctg
acatcgctcgatttcctcggcctcggggtgccgccgggcacgccgtcgctcggcgagttg
ctgagccagggcaaggccaacatcgacgcctggtggatttccatttccaccttcggcgtg
ctggtcgtcacgctgatgctgctgactttcatgggcgacgcgctgcgcgacgcgctcgac
ccgcgcaaggctgacaagtga
DBGET
integrated database retrieval system
