Variovorax sp. PMC12: C4F17_05925
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Entry
C4F17_05925 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_05925
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_05925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_05925
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_05925
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
AVQ80527
LinkDB
All DBs
Position
1:complement(1289558..1290775)
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AA seq
405 aa
AA seq
DB search
MQLKWTAVALAAITLVACGKKEEAAAPAAAPAPTAAAPAAAPAPAPAGDTLVVKIGHVAP
TSGPIAHLGKDNEMGAKMAIEDLNAKGVKIGDKTAKFELVAEDDAGDPKQGTAVAQKLVD
EKVNGVVGHLNSGTTIPASKLYSDAGIPQISPSATNPKYTRQGFKTTFRVVADDTQLGGT
LGKYAVDTLKGKNIAVIDDRTAYGQGVAEEFEKSAKAAGATIVGHEFTTDKSTDFNAILT
KLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAGDAIGEDMVV
CAEAGGVDGDFKQPLEDFKAKFKTKNGVEVQIYAPYVYDAVNVLAEAMVKAGSSDPEKYL
PEVGKVQYKGVTGPIAFDEKGDIKNGALTLYTYKGGVRTQIAVVR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaaatggactgcggtcgcactggctgcaatcacgcttgtggcttgcggcaag
aaagaagaagccgctgctcccgctgcagcgcccgcgccaacggccgctgctccggccgcc
gcgcctgcaccagcacctgccggggacacgctggtcgtcaagatcggccacgttgcacct
accagcggtcccatcgcccacctgggcaaggacaacgaaatgggcgccaagatggccatc
gaagacctgaacgccaagggcgtgaagatcggcgacaagaccgccaagttcgaactggtc
gccgaagacgatgctggcgatccgaagcagggcaccgcagtggcccagaagctcgtcgac
gaaaaggtcaacggcgtggtcggccacctgaactcgggcaccaccatccccgcctccaag
ctgtacagcgacgccggcattccgcagatctcgccttcggccacgaaccccaagtacacg
cgtcaaggcttcaagaccacgttccgcgtggtggctgacgacacgcaactcggcggcacg
ctgggcaagtacgcggtcgacacgctcaagggcaagaacatcgccgtgatcgacgaccgc
accgcctacggccagggcgtcgcagaagagttcgagaagtcggccaaggctgccggcgcc
accatcgtgggccacgaattcaccaccgacaagtcgaccgacttcaacgccatcctgacc
aagctgaagtccgccaagcccgacgttctgttcttcggcggcatggacgccgtcggcggc
ccgatgctcaagcaggtcaagcagctcggcctgaacgtcaagttcatgggtggcgacggc
ctgtgcaccggcgaacttccgaagctggctggcgatgccatcggcgaagacatggtggtg
tgcgctgaagcaggcggcgtggacggcgacttcaagcaaccgctggaagacttcaaggcc
aagttcaagaccaagaacggcgtggaagtgcagatctatgcaccgtacgtgtacgacgcg
gtcaacgtgctggccgaagccatggtcaaggccggttcgtccgaccccgaaaagtacctg
ccggaagtcggcaaggtgcaatacaagggcgtcaccggcccgatcgccttcgacgaaaag
ggcgacatcaagaacggcgcgctgacgctgtacacctacaagggtggtgtgcgcacgcag
atcgccgtggtgcgctga
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