Variovorax sp. PMC12: C4F17_05945
Help
Entry
C4F17_05945 CDS
T05380
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_05945 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_05945 (lptF)
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
C4F17_05945 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AVQ80531
LinkDB
All DBs
Position
1:1293258..1294382
Genome browser
AA seq
374 aa
AA seq
DB search
MLFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPQEVFLVMAYTVLGYM
PTILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLMDFVQPLFRFAWPVLILIAVMALVG
WPWANSQTIGMRKQYEQRSDIERVAPGEFRESAGRVRVFFIDKETPDNSKATNVFIWSVE
RNMQITTSARSGSIENIGDSRYLLLNNGQRLEQPMANTGLKISEFKTYGTRAGGSDGLTN
DATPSRARTTLSLLTDPSDMSRGELAWRIGMLLTAINFVLLALNVSSANPRVGRSGNLLL
ALFAFVIYYNMLNLGQSWISSGRFSMGGFMLVLHGGVLLINLAWLSARQNNWGRRARKAG
AAAPATTPKIEPTA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttattccattcttccctacgcaaggagctgtcccgcagcttcggagcgaccctcgtg
gttctggtcaccatcgtgatgaccatgatgctcatccgtaccctcgggctcgcgtccaag
ggcagtgtgaacccgcaggaggtgttcctggtcatggcctacacggtgctcggctacatg
ccgaccatcctgagcctgagcctgttcatcgccatcgtcggcacgctctcgcgcatgtac
cgcgacagcgaaatggtgatctggttctccagcggccgcggcctcatggacttcgtgcag
ccgctgttccgcttcgcctggccggtgctgatcctgatcgcggtgatggcgctggtcggc
tggccgtgggccaactcgcagaccatcggcatgcgcaagcagtacgagcagcgcagcgac
atcgagcgcgtggcgcccggtgaattccgcgaatccgcgggccgggtgcgggtgttcttc
atcgacaaggaaacgccggacaactccaaggccaccaacgtcttcatctggtcggtcgag
cgcaacatgcagatcaccacctcggcgcgcagcggcagcatcgagaacatcggcgattcc
cgctacctgctgctcaacaacgggcagcgcctggaacagccgatggccaacaccggcctg
aagatcagcgaattcaagacgtacggcacccgcgccggcggcagcgacggcctcacgaac
gacgccacgccctcgcgcgcccgcaccacgctgtcgctgctgaccgacccgagcgacatg
agcaggggcgaactcgcctggcgcatcggcatgctgctgacggccatcaacttcgtgctg
ctggcgctgaacgtctccagcgccaatccgcgtgtcgggcgcagcggcaacctgctgctc
gcgctgttcgccttcgtcatctactacaacatgctcaacctgggccagagctggatcagc
tcgggccgcttcagcatgggcggcttcatgctcgtgctgcacggcggcgtgctcctcatc
aacctcgcgtggttgagcgcgcgccagaacaactggggccgccgcgccaggaaggccggc
gccgccgcgcccgcgaccacacccaagatcgaacccaccgcgtga
DBGET
integrated database retrieval system
