Variovorax sp. PMC12: C4F17_06070
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Entry
C4F17_06070 CDS
T05380
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00640
Propanoate metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C4F17_06070 (prpF)
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Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
AVQ80554
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Position
1:complement(1323133..1324323)
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AA seq
396 aa
AA seq
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MASAPQIRIPATYMRGGTSKGVFFRLHDLPEAARVPGKARDALLLRVIGSPDPYGKQIDG
MGAATSSTSKTVILSKSERPGHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISNGL
IDAERVPRNGVAVVRIWQANIGKTIVAHVPMTDGEVQETGGFELDGVTFPAAEVQLEFMD
PAAEEEGAGGAMFPTGQLVDELEVPGVGTLRATMINAGIPTIFVNAEAIGYTGTELQDAI
NGDPAALARFEAIRAHGAVRMGLIRHIGEAAGRQHTPKVAFVAKPAGYTASSGKQVSAGD
VDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGDREAVRFGHPSGTLRVG
AQASKVDGEWQVTKAVMSRSARVLMEGWVRMPGDAI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcaccacagatcagaattcccgccacctacatgcgcggcggcaccagcaag
ggcgtgttcttccgcctgcatgacctgcccgaggcggcccgggtgcccggcaaggcgcgc
gacgcgctgctgctgcgcgtcatcggcagccccgacccctacggcaagcagatcgacggc
atgggcgccgccacctcgagcacgagcaagacggtcatcctgtcgaaaagcgagcggccg
ggccacgacgtggactacctgttcggccaggtgtcgatcgaccagcccttcgtcgactgg
agcggcaactgcggcaacctctcggccgccgtcgggcccttcgccatcagcaacggcctg
atcgacgccgagcgggttccgcgcaacggcgtggcggtggtgcgcatctggcaggccaac
atcggcaagaccatcgtcgcgcacgtgcccatgaccgacggcgaggttcaggaaaccggc
ggcttcgaactcgacggcgtgaccttcccggccgccgaagtgcagctcgaattcatggac
ccggcggcggaagaagagggcgctggcggtgcgatgttccccaccggccagctggtcgac
gagctggaggtcccgggcgtcggcacgctgcgggcaacgatgatcaacgccggcatcccg
accatcttcgtcaacgccgaagccatcggctacaccggcaccgaactgcaggacgcgatc
aacggcgaccccgccgcgctggccaggttcgaggccatccgcgcccacggcgcggtgcgc
atgggcctcatcaggcacatcggcgaagcggccggccggcagcacacgcccaaggtcgcg
ttcgtggcaaagcccgccggctacaccgcctccagcggcaagcaggtgagcgcgggcgat
gtcgacctgctggtgcgcgcgctgtccatgggcaagctgcaccacgccatgatgggcact
gcggccgtggccatcggcacggccgccgccattccgggcacgctggtgaaccttgcggcc
ggcggcggcgaccgcgaggccgtgcgcttcggtcacccttcgggcaccttgcgcgtgggc
gcgcaggcgagcaaggtggacggcgaatggcaagtgaccaaggcggtcatgagccgcagc
gcccgcgtgctgatggaaggctgggtgcgcatgcccggcgacgccatctga
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