Variovorax sp. PMC12: C4F17_06445
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Entry
C4F17_06445 CDS
T05380
Name
(GenBank) 3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00260
Glycine, serine and threonine metabolism
vam00270
Cysteine and methionine metabolism
vam00680
Methane metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
C4F17_06445
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4F17_06445
00270 Cysteine and methionine metabolism
C4F17_06445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vam04147
]
C4F17_06445
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
C4F17_06445
1.1.1.399 2-oxoglutarate reductase
C4F17_06445
Exosome [BR:
vam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4F17_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
AdoHcyase_NAD
KARI_N
NAD_binding_2
XdhC_C
TrkA_N
RS_preATP-grasp-like
FAM222A
ApbA
Motif
Other DBs
NCBI-ProteinID:
AVQ80620
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All DBs
Position
1:1397516..1398523
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AA seq
335 aa
AA seq
DB search
MNIVILDDYQDAVRKLRCAAKLDAYAAKVYTNTVKGIGQLSVRLKDADVIVLIRERTQIS
RQLIEKLPKLKLISQTGRVAGHIDVAACTERGIAVAEGSGSPQAPAELTWALIMAAMRRL
PQYISNLKHGAWQQSGLKSASMPPNFGLGSVLKGKTLCIWGYGRIGQLVARYGQAFGMQV
VIWGREASCAKARSDGFQVAQNRQEFFAAADVLSVHLRLNDETNGLITLEDLSRMKPTAL
FVNTSRAELVEADALLAALNRGRPGLAAIDVFESEPPLQGHALLRLENCICTPHIGYVEQ
ESYESYFGQAFDNVVSYINGNPTNIVNPGALQVRR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtgatcctcgacgactatcaggacgccgtgcgcaaattgcgctgcgccgcc
aagctggacgcgtacgcagccaaggtctacaccaacacggtcaagggcatcgggcaactc
tcggttcgcctcaaggacgccgacgtgatcgtgctgattcgcgagcgcacacagatctcc
cggcagctcatcgagaagctgcccaagctcaagctcatttcgcaaacgggtcgcgtcgca
ggccacatcgacgtggcggcctgcaccgagcgcggcatcgccgtggcggaaggctccggc
tccccccaggcacctgccgagctcacctgggcgctcatcatggccgccatgcgccggctg
ccgcaatacatcagcaacctcaagcacggggcgtggcagcaatcgggcctcaagtcggcc
tcgatgccgcccaatttcgggctgggctcggtgctcaagggcaagacgctctgcatctgg
ggctacggccgcatcggccagctggtcgcgcgctacgggcaagccttcggcatgcaggtc
gtgatctgggggcgtgaagccagctgcgccaaggcccgctccgacggcttccaggtggcg
cagaaccgccaggagttcttcgcggccgccgacgtgctgtcggtccacctgcggctcaat
gacgaaaccaacggtctcatcacgctcgaggatctctcgcgcatgaagccgacggcgctg
ttcgtcaacacctcgcgtgccgagctggtcgaggccgacgcgctgctcgcggcgctcaac
cgtggccgccccgggctggccgccatcgacgtcttcgagagcgagccgccgctgcagggc
cacgcgctgctgcggctggagaactgcatctgcaccccgcacatcggctatgtcgagcag
gagagctacgagagctacttcggccaggccttcgacaacgtcgtgagctacatcaacggc
aatcccacgaacatcgtgaatcccggcgcgctgcaggttcgccggtga
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