Variovorax sp. PMC12: C4F17_06550
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Entry
C4F17_06550 CDS
T05380
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00540
Lipopolysaccharide biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C4F17_06550 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_06550 (lpxB)
Enzymes [BR:
vam01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
C4F17_06550 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Lipid A
C4F17_06550 (lpxB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
AVQ84499
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All DBs
Position
1:complement(1420158..1421306)
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AA seq
382 aa
AA seq
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MQKDGQRRFALVAGEASGDLLAGLLLDGLRARWPDLQTVGIGGPRMLAHGFQSWWPQEKL
AVRGYVEVLRHYAEIAGIRRQLKARLLREWAELFIGVDAPDFNLDLEAGLRSRGMKTVHF
ICPSIWAWRPERIEKVRAAADHVLCIFPFEPELLAEHGVAGSYVGHPLANVIPMAPDRAG
ARAAMGFAPDAQVVALLPGSRRSEVRYLAARFFAAAALMQKERPGVQFVAPIIPSLRAEV
EALLQASGMTGRVKLLDGQSHAALAACDATLIASGTATLEAALFKRPMVIAYNMNALSWR
LMQRKQLQPWVGLPNILCRDFVVPELLQEAATPEALAKATLAWLDAPEKTRALQQRFSEL
HVQLQRDTPTLCADAIQKVLEG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggacggacagcgacgctttgcgctggtcgccggcgaagcctccggcgacttg
ctcgcggggctgctgctcgacggcctgcgggcccgctggcccgacctgcagacggtgggc
atcggcggtccccgcatgctggcccacggcttccagagctggtggccgcaggaaaagctc
gcggtgcgcggttacgtcgaagtgctgcggcactacgccgagatcgccggcatccggcgc
cagctcaaggcccgcctgctgcgcgagtgggccgagctgttcatcggcgtcgacgccccc
gacttcaatctcgatctcgaagcaggcctgcgcagccgtggcatgaagacggtgcatttc
atctgcccgtcgatctgggcctggcggccggagcgcatcgagaaggtccgtgccgccgcc
gaccatgtgctgtgcatctttccgttcgagcccgagttgctggcggagcatggcgtcgcg
ggcagctacgtcggccacccgctggccaacgtgattccgatggcgcccgaccgcgccggc
gcgcgcgccgccatgggcttcgcgcccgacgcacaggtcgtggccctgctgcccggcagc
cgccgttcggaagtgcgctacctggcggcccggttcttcgcggccgccgcgctgatgcag
aaggagcggccgggcgtccagttcgtggcgcccatcattccgagcctgcgcgcggaagtc
gaggcgctgctgcaggccagcggcatgaccggccgcgtgaagctgctcgacggccagtcg
catgccgcgctggccgcctgtgacgccacgctgatcgccagcggtactgccacgctcgaa
gcggcgctgttcaagcggccgatggtcatcgcctacaacatgaatgcgctgtcttggcgc
ctcatgcagcgcaagcagctgcagccctgggtcggcctgccgaacatcctgtgccgcgac
ttcgtggtgccggaactgctgcaggaagccgccacgccggaagcgctggccaaggccacg
ttggcctggttggatgctccggagaagacccgggcgctgcaacaaagattttcagagctg
catgtgcaattgcagcgcgatacgccgacactttgcgccgatgcgatccagaaagttctt
gaaggctga
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