Variovorax sp. PMC12: C4F17_06710
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Entry
C4F17_06710 CDS
T05380
Name
(GenBank) HAMP domain-containing protein
KO
K07638
two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:
2.7.13.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_06710
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vam01001
]
C4F17_06710
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_06710
Enzymes [BR:
vam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C4F17_06710
Protein kinases [BR:
vam01001
]
Histidine kinases
OmpR family
C4F17_06710
Two-component system [BR:
vam02022
]
OmpR family
EnvZ-OmpR (osmotic stress response)
C4F17_06710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RisS_PPD
HATPase_c
HisKA
HAMP
HATPase_c_2
DUF202
HATPase_c_5
Anthrone_oxy
Motif
Other DBs
NCBI-ProteinID:
AVQ84503
LinkDB
All DBs
Position
1:1451502..1452923
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AA seq
473 aa
AA seq
DB search
MPSPLEASSHRDRRPGLKLGFSLFWRTFFLLALLLIGCTVAWLQTFRSLEYEPRAIQTAH
QIASLVNLTRAALVYSDAITRVSLIKTLADQEGVRILPREPNDRFEPYTSGALDLRVTEE
LIDQLGEGTTVASRVNDEAGLWIGFTIESDTYWLLLDPTRFSRVGGRTWLVWLSTAMALS
LAGAALITRLINLPLKQLSRATMQVREGEYEAHRLDERARTNEIRAVNIGFNRMADQLAK
IEQDRAIMLAGISHDLRTPLARLRLETEMSVADEDARDHMAADIAQLDAIIDKFLDYARP
DHVDPRPVLLRDVVDACTYAVQDYDEMNITVDVPADLRVLGDEVELTRVISNLVENARRY
GKTPSTGVADVTIQAQANNDAVLIKVRDHGAGVEPALLSQLTKPFFRGDTARTSAAGAGL
GLSIVAKNIERMGGTFALTSTPGRGLAAHIRMPRAMPAAAGKPGESQGGKKPA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcccgctcgaggcgagttcgcaccgtgatcgtcgccccggcctcaagctgggt
ttcagccttttctggcgcaccttcttcctgctcgcgctgctgctgatcggctgtacggtc
gcctggctgcagaccttccgctcgctcgaatacgagccccgtgccatccagaccgcgcac
cagatcgcctcgctcgtgaacctcacgcgcgcggcgctggtgtattcggacgcgatcacg
cgggtctcgctgatcaagacactggccgaccaggaaggcgtgcgcatcctgccgcgcgag
cccaacgaccgcttcgagccctacaccagcggtgcgctcgacctgcgcgtgaccgaggaa
ctgatcgaccagctcggcgaaggcaccacggtggcgagccgcgtgaacgacgaagccggc
ctgtggatcggcttcaccatcgagagcgacacttactggctgctgctcgaccccacgcgc
ttcagccgcgtgggcgggcgcacctggctggtctggctgagcacggcgatggcgctgtcg
ctggcgggtgcggcgctgatcacgcggctcatcaacctgccgctcaagcagctgtcgcgc
gcgaccatgcaggtgcgcgaaggcgagtacgaggcccaccggctcgacgagcgcgcccgc
accaacgagatccgcgccgtgaacatcggcttcaaccgcatggccgaccagctcgccaag
atcgagcaggaccgcgccatcatgctggccggcatctcgcacgacctgcgcacgccgctg
gcacggctgcggctcgaaaccgagatgagcgtggccgacgaggacgcccgcgaccacatg
gccgccgacatcgcccagctcgacgcgatcatcgacaagttcctcgactacgcccggccc
gaccatgtcgatccgcgcccggtgctgctgcgcgacgtggtcgacgcctgcacctacgcc
gtgcaggactacgacgagatgaacatcaccgtcgacgtgcccgccgacctgcgcgtgctg
ggcgacgaggtcgaactcacgcgggtgatctccaacctggtagagaacgcgcggcgctac
ggcaagacgccctccaccggcgtggccgacgtgacgatccaggcgcaggccaacaacgac
gcggtgctgatcaaggtgcgagaccacggcgcgggcgtggagcctgccctgctctcgcag
ctgaccaagcccttcttccgcggcgacaccgcccgcacctcggcggccggcgcgggcctg
ggcctgtcgatcgtggcgaagaacatcgagcgcatgggcggcaccttcgcgctgaccagc
acgccggggcgcggcctcgcggcccacatccggatgccgcgcgcaatgccggcggcggcc
ggcaagcccggagagtcgcagggcggcaagaagccggcctga
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