Variovorax sp. PMC12: C4F17_06920
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Entry
C4F17_06920 CDS
T05380
Name
(GenBank) chloride channel protein
KO
K03281
chloride channel protein, CIC family
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_06920
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_06920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-ProteinID:
AVQ80700
LinkDB
All DBs
Position
1:1500063..1501778
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AA seq
571 aa
AA seq
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MRPASVFLNIRSALQRLFGVSGWQSMLLWSIAAGLLGTLATELFRAALYGFEHLVLGPGE
GLVAMARHLPWWARVACPTLGGLVAGLLLVLAKRVAERSATSDYMEAIVLGDGRIPVAQT
LVRSASSLVSIGTGGSIGREGSMVQLAALAASQLGRLLRFPAERLRLLVACGAAAGLTAA
YNAPIAGAFFVAEIVLGSIAMESVGPIIIASVVANVAMRALPGYQPPYKMPAFPEIHGAE
VVLFCVLGVLLGFASVGFLRALQGSRALFARLPLALPWRLALGGLLMGAISVPMPEVWGN
GYSVVNAVLHTPWPWTLIAMVLVAKAAATMATAGSGAVGGVFTPALFFGCMIGALFGLAV
QALWPASSSAPFAYAIVGMGAFLAGATQAPLMAILMIFEMTLSYQVMLPLMAASVIAYFI
ARSANAGSMYEITLRRNEQRDAQLRLRGLHVRDLVQPAETVVGPEADREAMSRLFLQHPV
KYLYVVDAGGRYLGVVPLAALGAAPAETTAGALLSQAILPITADTGLGEALQRFLEHRGE
RLPVIESAADPVLLGVAAKSALLATYVRLSE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccggcctcggttttcctgaatattcgttccgcgctgcagcggcttttcggcgtt
tcgggctggcagtcgatgctgctctggtccattgccgcgggcctgctcggcacgctggcg
accgaacttttccgcgcggcgctctacggcttcgagcatctggtgctgggccccggggaa
gggctggtggccatggccaggcacctgccgtggtgggcgcgcgtggcctgccccacgctc
ggcgggctggtggcgggcctgctgctggtgcttgccaagcgcgtggcggagcgaagcgcc
acctccgactacatggaagcgatcgtgcttggcgacggacgcattccagtcgcgcagacg
ctggtgcgcagcgcgtcgtcgctggtgagcatcggcaccggcggctccatagggcgcgaa
ggctcgatggtgcagctcgcggcgctggccgcctcgcaactggggcggctgctgcgcttt
ccggcggaacggctgcggctgctggtggcctgcggcgccgccgccggcctcacggccgcc
tacaacgcgcccatcgcgggcgccttcttcgtcgccgaaatcgtgctgggctcgatcgcg
atggaaagcgtggggccgatcatcatcgcgtcggtggtggcgaacgtcgcgatgcgcgcg
ctgccgggctatcagccgccttacaagatgccggcgttccccgagatccacggcgcggag
gtggtgctgttctgcgtgctcggcgtgctgctgggctttgcgtccgtcgggttcctgcgt
gcgctgcagggcagccgcgcgctgttcgccaggctgccgctcgcgctgccgtggcggctg
gcgctgggcgggctgctgatgggcgccatttccgtaccgatgcccgaggtctggggcaac
ggctacagcgtggtcaacgcggtgctgcacacgccgtggccctggacgctgatcgcgatg
gtgctggtcgccaaggcggccgcgaccatggccaccgccggctcgggcgccgtgggcggc
gtgttcacgccggcgctgttcttcggctgcatgatcggtgcgctgttcgggctggcggtg
caggcgctgtggccggcttccagctccgcgcctttcgcctatgccatcgtcggcatgggc
gccttcctggcgggagctacgcaggcgccgctgatggcgatattgatgatcttcgagatg
acgctgagctatcaggtcatgctgccgctgatggccgcgagcgtcatcgcgtacttcatc
gcgcgctcggccaatgccggctccatgtacgagatcacgctgcgccgcaacgagcagcgc
gacgcgcaactgcgcctgcgcgggctgcacgtgcgcgacctggtgcagccggccgagacc
gtggtcggccccgaggcggaccgcgaggcgatgagcaggctcttcctgcagcacccggtg
aagtacctgtacgtggtcgatgccggcgggcgctacctgggcgtggtgccgctggccgcg
ctgggcgcagcgccggccgaaaccacggccggcgccctgctctcgcaggcgatcctgccg
atcaccgccgacaccggcctgggcgaagcgctgcagcgcttcctggagcaccgtggcgag
cgactgccggtgatcgagagcgcggccgacccggtgctgctgggcgtggcggccaagagc
gcgctgctcgccacctatgtgcggctgagcgagtag
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