Variovorax sp. PMC12: C4F17_07040
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Entry
C4F17_07040 CDS
T05380
Name
(GenBank) proline/glycine betaine ABC transporter permease ProW
KO
K02001
glycine betaine/proline transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_07040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_07040
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
C4F17_07040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AVQ80723
LinkDB
All DBs
Position
1:1525364..1526545
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AA seq
393 aa
AA seq
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MNDTAMPSELAPLNDAASMLATPAPATTPVDPWEALSAAPDPASTSAWLDAPAPANAAHQ
LAGQADAASGGFHLHRLWDGSLPVEAWINQGLGWVVEHFRPFFQTVRLPIDSTLNSVQSL
LTGLPTLAMIALIGLFAWQFAGRALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCM
VIGLPLGVLLASSDRAQRIMRPVLDAMQTTPAFVYLVPVVMLFGIGNVPGVIVTIVFALA
PLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVV
IASMIAVGGLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRLTQAMGKSRRAGGRRWWH
TGPAGFALRVLQRAVAPGRSAGEPAPALSAQAQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaccgcaatgccctccgaactcgcgcccctgaacgacgctgcttccatgctc
gcgacgcccgcaccggcgacgacgccggtcgacccctgggaagccctgtccgccgcgccc
gaccccgcgtcgaccagcgcctggctcgacgcacccgcgcccgccaatgcggcgcaccag
ctggccggccaggccgatgccgccagcggcggcttccatctgcaccgcctgtgggacggc
tcgctgcccgtcgaggcctggatcaaccagggcctgggctgggtggtcgagcacttccgc
cccttcttccagaccgtgcgcctgcccatcgacagcacgctcaactcggtgcagagcctg
ctgaccggcctgcccacgctcgcgatgattgcgctgatcggcctgttcgcctggcagttc
gccggccgcgcgctggccatcggcaccaccgtggcgctgctgctggtggccatgctgggc
atctggcccgaggcgatggtgacgctgtcgctggtgctgacctcgctggtcttctgcatg
gtcatcggcctgccgctgggcgtgctgctggccagcagcgaccgggcgcagcggatcatg
cggccggtgctcgacgcgatgcagaccacgcccgccttcgtgtacctggtgccggtggtg
atgctgttcggcatcggcaacgtgcccggggtgatcgtcaccatcgtcttcgcgctggcc
ccgctggtgcgcctgaccaacctcggcttgcgccaggtgcgccccgacctcatcgaggcg
gcgcgcgcctacggcgcctcgccctggcagatgctggtgaaggtgcagctgccgctggcc
atgccgtcgatcatggcgggcatcaaccaggcgctgatgctgtcgctgtcgatggtggtg
atcgcctcgatgatcgccgtgggcggcctgggccagatggtgcttcgcggcatcggccgg
ctcgacatgggcctggcgaccgtgggcggcctgggcatcgtgctgctggcgatctcgctg
gaccgcctgacgcaggccatgggcaagtcgcgccgcgccggcggccgccgctggtggcac
accgggccggcgggcttcgcgctgcgcgtgctgcaacgcgccgtggcgccgggccgcagc
gccggcgaaccggcacccgccctgtcggcccaggcgcaatga
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