Variovorax sp. PMC12: C4F17_07375
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Entry
C4F17_07375 CDS
T05380
Symbol
hpnC
Name
(GenBank) squalene synthase HpnC
KO
K21679
hydroxysqualene synthase [EC:
4.2.3.156
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
C4F17_07375 (hpnC)
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.156 hydroxysqualene synthase
C4F17_07375 (hpnC)
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Xpo1
Motif
Other DBs
NCBI-ProteinID:
AVQ80784
UniProt:
A0A2P1V6I2
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All DBs
Position
1:1588681..1589595
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AA seq
304 aa
AA seq
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MSATPHLANPPAHYENFPVASWLCPPHLRPPIAAIYHFARTADDIADEGEALPDQRLADL
RAYREELAAAAQGEVLPSSRWPRVFGPLAHSIAQHKLPEDLLADLLSAFMQDIEKTRDHG
TYADRAELLDYCRRSANPVGRLLLHLYGVHDAQALAQSDAICSALQLINFWQDPSVDLPR
GRFYFPLTDCDRRSLTRENFKVFAPLSPAPPPQEAINLIAVVSYWARELMTEGAPLVHRL
PGRAGWELRLVVQGGLRILDKIVDLGFDTFSQRPTVGKADAPLLLWKAMRMRRQSRPMKA
APPR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgccactccccaccttgccaacccgccggcccactacgagaacttccccgtagcc
tcctggctgtgcccgccgcacctgcgcccgcccattgccgcgatctaccacttcgcgcgc
accgccgacgacatcgccgacgaaggcgaggccttgccggatcagcggctggccgatctg
cgcgcctaccgagaggaactggctgccgccgcgcagggcgaggtgctgccgtcatcgcgc
tggccccgtgtgttcggcccgctggcccacagcatcgcgcagcacaagctgcccgaagac
ctgctcgccgacctgctgagcgccttcatgcaggacatcgagaaaacccgcgaccacggc
acctacgccgaccgcgccgagctgctcgactactgccgccgctccgccaacccggtcggc
cggctgctgttgcacctctacggcgtgcacgacgcgcaggcgctggcgcagagcgacgcc
atctgcagcgcgctgcagctcatcaatttctggcaggacccgagcgtcgacctgccgcgc
gggcgtttctatttcccgctgaccgactgcgaccggcgcagcctgacgcgcgagaacttc
aaggtgttcgcgccgctgtcgccggccccgccgccgcaggaagctatcaatctgatagca
gtggtgtcttactgggcgcgcgagctcatgacggaaggcgcgccgctggtgcaccggctg
cccggccgcgcgggctgggaactgcggctcgtggtgcaaggcgggctgcgcatcctcgac
aagatcgtcgacctcggcttcgacaccttctcgcagcgccccaccgtcggcaaggccgat
gcccccctgctgctctggaaggccatgcggatgcggagacaatcacggcccatgaaagca
gcgcctccccgatga
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