Variovorax sp. PMC12: C4F17_07480
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Entry
C4F17_07480 CDS
T05380
Name
(GenBank) DUF1956 domain-containing protein
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_07480
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C4F17_07480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
CecR_C
Motif
Other DBs
NCBI-ProteinID:
AVQ84515
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All DBs
Position
1:1607384..1608079
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AA seq
231 aa
AA seq
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MNAKATTTQAARRAPRSDGAEARHRLLHTALRLFAQKGFAKTSTREIAKEAGANISAISY
YFGDKEGLYAATFNEPMGGDSSDLVAACKVPGRPLEETLRICMVSMIDPLKQGEIVRQCI
QLHMREMLERTSRWAKELEHDIKGPHRAIAELLCRHLGVARPDDDIHRLTFAITGLSMQL
YVSQDFIEAIRPSLLRTPRGIDTWADRLTGYAMALVAAEAARRRADRKPTQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaaagccaccaccacccaggccgcgcgccgcgcaccgcgcagcgacggcgcg
gaggcacgccaccgtctgcttcacacggcgctgcggctgttcgcgcagaagggcttcgcc
aagacctccacgcgcgagatcgccaaggaggcaggcgccaacatctcggccatcagctac
tacttcggcgacaaggaaggcctctacgcggccaccttcaacgagccgatgggcggcgac
tccagcgacctcgtggcggcctgcaaggtgccggggcgccctctggaggaaacgctgcgc
atctgcatggtgtcgatgatcgatccgctcaagcagggcgagatcgtgcgccaatgcatc
cagctgcacatgcgcgagatgctcgagcgcaccagccgatgggccaaggagctcgagcac
gacatcaagggcccgcaccgcgccatcgccgagctgctttgccgccacctgggcgtggcg
cggcccgacgacgacatccaccgcctcaccttcgctatcaccgggctgtcgatgcagctc
tacgtgagccaggacttcatcgaggccatccgtccgtcgctgctgcgcacgccgcgcggc
atcgacacctgggccgaccgcctgaccggctacgcaatggcgctggtcgcggccgaggcg
gcacgccgccgcgccgacagaaagccaacccaatga
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