KEGG   Variovorax sp. PMC12: C4F17_07590
Entry
C4F17_07590       CDS       T05380                                 
Name
(GenBank) DNA-3-methyladenine glycosylase
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
vam  Variovorax sp. PMC12
Pathway
vam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C4F17_07590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vam03400]
    C4F17_07590
Enzymes [BR:vam01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     C4F17_07590
DNA repair and recombination proteins [BR:vam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C4F17_07590
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AVQ80821
LinkDB
Position
1:complement(1629960..1630610)
AA seq 216 aa
MPATKKSSVQIYTPDYWEEACKHLSKKDRVMKRLIPKFGDACLESRGDAFTTLARSVVGQ
QISVKAAQTVWDKFAALPRKLTPANVLKLKVDDMRGAGLSARKIEYLVDLALHFDSGLVH
VDSWKDMSDELIIEELVAIRGIGRWTAEMFLIFHLMRPNVLPVDDLGLLNGISVNYFSGD
PVSRSDARDVAVAWAPYCSVATWYIWRSLDPVPVAY
NT seq 651 nt   +upstreamnt  +downstreamnt
atgcccgccaccaagaagtccagcgtacagatctatacgccggactattgggaggaggcg
tgcaagcacctttccaagaaagaccgcgtcatgaagcggttgatcccgaagttcggcgac
gcctgcctggagtcgcgcggcgacgcgttcaccacgctggcgcgcagcgtggtcggccag
cagatttcggtgaaggcggcgcagacggtctgggacaagttcgcggcgctgccccgcaag
ctgacgccggccaacgtgctcaagctcaaggtcgacgacatgcgcggtgcgggcctctcg
gcacgcaagatcgagtacttggtcgacctggccctgcacttcgattcgggcctggtgcac
gtcgattcgtggaaagacatgtcggacgagctcatcatcgaggagctcgtggccatccga
ggcatcggccgctggaccgccgagatgttcctcatcttccacctgatgcgcccgaacgtg
ctgcctgtggacgacctggggctgctcaacggcatcagcgtcaattatttttcgggcgat
ccggtcagccgcagcgatgcccgcgacgtggccgtggcctgggccccgtattgcagcgtg
gcgacttggtatatttggcgatcactggacccggttccagtcgcatattga

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